Gene : AT1G65130 A. thaliana TAIR10
Defline:  (1 of 13) PTHR22975:SF9 - F6D8.33-RELATED Genomic Order:  5438
Name:  ? AT1G65130 Secondary Identifier:  ? PAC:19651176
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65130 0.5kb upstream 0.5kb upstream 5051 true Chr1: 24196472-24201522 Arabidopsis thaliana
AT1G65130 0.5kb upstream 0.5kb upstream 500 false Chr1: 24201023-24201522 Arabidopsis thaliana
AT1G65130 0.5kb downstream 0.5kb downstream 5051 true Chr1: 24195972-24201022 Arabidopsis thaliana
AT1G65130 0.5kb downstream 0.5kb downstream 500 false Chr1: 24195972-24196471 Arabidopsis thaliana
AT1G65130 1.0kb upstream 1.0kb upstream 5551 true Chr1: 24196472-24202022 Arabidopsis thaliana
AT1G65130 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24201023-24202022 Arabidopsis thaliana
AT1G65130 1.0kb downstream 1.0kb downstream 5551 true Chr1: 24195472-24201022 Arabidopsis thaliana
AT1G65130 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24195472-24196471 Arabidopsis thaliana
AT1G65130 2.0kb upstream 2.0kb upstream 6551 true Chr1: 24196472-24203022 Arabidopsis thaliana
AT1G65130 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24201023-24203022 Arabidopsis thaliana
AT1G65130 2.0kb downstream 2.0kb downstream 6551 true Chr1: 24194472-24201022 Arabidopsis thaliana
AT1G65130 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24194472-24196471 Arabidopsis thaliana
AT1G65130 5.0kb upstream 5.0kb upstream 9551 true Chr1: 24196472-24206022 Arabidopsis thaliana
AT1G65130 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24201023-24206022 Arabidopsis thaliana
AT1G65130 5.0kb downstream 5.0kb downstream 9551 true Chr1: 24191472-24201022 Arabidopsis thaliana
AT1G65130 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24191472-24196471 Arabidopsis thaliana
AT1G65130 10.0kb upstream 10.0kb upstream 14551 true Chr1: 24196472-24211022 Arabidopsis thaliana
AT1G65130 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24201023-24211022 Arabidopsis thaliana
AT1G65130 10.0kb downstream 10.0kb downstream 14551 true Chr1: 24186472-24201022 Arabidopsis thaliana
AT1G65130 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24186472-24196471 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499746 5273 Angiosperm View MSA
122338614 5261 Brassicaceae View MSA
123779169 5264 Brassicales-Malvales View MSA
124277499 5266 SBM View MSA
124132693 5268 Malvidae View MSA
123860967 5270 Rosid View MSA
123446543 5271 Pentapetalae View MSA
122482092 5272 Eudicot View MSA
120773083 5274 Embryophyte View MSA
122815407 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148     Low  
cufflinks 0.173     Low  
cufflinks 0.131     Low  
cufflinks 0.152     Low  
cufflinks 0.096     Low Low
cufflinks 0.189     Low High

0 Strain