Gene : AT1G53770 A. thaliana TAIR10
Defline:  (1 of 3) K03691 - peptide-O-fucosyltransferase (POFUT) Genomic Order:  4425
Name:  ? AT1G53770 Secondary Identifier:  ? PAC:19651195
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53770 0.5kb upstream 0.5kb upstream 2948 true Chr1: 20071311-20074258 Arabidopsis thaliana
AT1G53770 0.5kb upstream 0.5kb upstream 500 false Chr1: 20073759-20074258 Arabidopsis thaliana
AT1G53770 0.5kb downstream 0.5kb downstream 2948 true Chr1: 20070811-20073758 Arabidopsis thaliana
AT1G53770 0.5kb downstream 0.5kb downstream 500 false Chr1: 20070811-20071310 Arabidopsis thaliana
AT1G53770 1.0kb upstream 1.0kb upstream 3448 true Chr1: 20071311-20074758 Arabidopsis thaliana
AT1G53770 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20073759-20074758 Arabidopsis thaliana
AT1G53770 1.0kb downstream 1.0kb downstream 3448 true Chr1: 20070311-20073758 Arabidopsis thaliana
AT1G53770 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20070311-20071310 Arabidopsis thaliana
AT1G53770 2.0kb upstream 2.0kb upstream 4448 true Chr1: 20071311-20075758 Arabidopsis thaliana
AT1G53770 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20073759-20075758 Arabidopsis thaliana
AT1G53770 2.0kb downstream 2.0kb downstream 4448 true Chr1: 20069311-20073758 Arabidopsis thaliana
AT1G53770 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20069311-20071310 Arabidopsis thaliana
AT1G53770 5.0kb upstream 5.0kb upstream 7448 true Chr1: 20071311-20078758 Arabidopsis thaliana
AT1G53770 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20073759-20078758 Arabidopsis thaliana
AT1G53770 5.0kb downstream 5.0kb downstream 7448 true Chr1: 20066311-20073758 Arabidopsis thaliana
AT1G53770 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20066311-20071310 Arabidopsis thaliana
AT1G53770 10.0kb upstream 10.0kb upstream 12448 true Chr1: 20071311-20083758 Arabidopsis thaliana
AT1G53770 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20073759-20083758 Arabidopsis thaliana
AT1G53770 10.0kb downstream 10.0kb downstream 12448 true Chr1: 20061311-20073758 Arabidopsis thaliana
AT1G53770 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20061311-20071310 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371432 5261 Brassicaceae View MSA
123840985 5264 Brassicales-Malvales View MSA
124322815 5266 SBM View MSA
124169233 5268 Malvidae View MSA
124067328 5270 Rosid View MSA
123742229 5271 Pentapetalae View MSA
122789958 5272 Eudicot View MSA
122047724 5273 Angiosperm View MSA
121348128 5274 Embryophyte View MSA
123380736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38        
cufflinks 3.308        
cufflinks 2.447       Low
cufflinks 3.776       High
cufflinks 3.217        
cufflinks 2.877        

0 Strain