Gene : AT1G53610 A. thaliana TAIR10
Genomic Order:  4405 Name:  ? AT1G53610
Secondary Identifier:  ? PAC:19653288
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53610 0.5kb upstream 0.5kb upstream 825 true Chr1: 20008996-20009820 Arabidopsis thaliana
AT1G53610 0.5kb upstream 0.5kb upstream 500 false Chr1: 20009321-20009820 Arabidopsis thaliana
AT1G53610 0.5kb downstream 0.5kb downstream 825 true Chr1: 20008496-20009320 Arabidopsis thaliana
AT1G53610 0.5kb downstream 0.5kb downstream 500 false Chr1: 20008496-20008995 Arabidopsis thaliana
AT1G53610 1.0kb upstream 1.0kb upstream 1325 true Chr1: 20008996-20010320 Arabidopsis thaliana
AT1G53610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20009321-20010320 Arabidopsis thaliana
AT1G53610 1.0kb downstream 1.0kb downstream 1325 true Chr1: 20007996-20009320 Arabidopsis thaliana
AT1G53610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20007996-20008995 Arabidopsis thaliana
AT1G53610 2.0kb upstream 2.0kb upstream 2325 true Chr1: 20008996-20011320 Arabidopsis thaliana
AT1G53610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20009321-20011320 Arabidopsis thaliana
AT1G53610 2.0kb downstream 2.0kb downstream 2325 true Chr1: 20006996-20009320 Arabidopsis thaliana
AT1G53610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20006996-20008995 Arabidopsis thaliana
AT1G53610 5.0kb upstream 5.0kb upstream 5325 true Chr1: 20008996-20014320 Arabidopsis thaliana
AT1G53610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20009321-20014320 Arabidopsis thaliana
AT1G53610 5.0kb downstream 5.0kb downstream 5325 true Chr1: 20003996-20009320 Arabidopsis thaliana
AT1G53610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20003996-20008995 Arabidopsis thaliana
AT1G53610 10.0kb upstream 10.0kb upstream 10325 true Chr1: 20008996-20019320 Arabidopsis thaliana
AT1G53610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20009321-20019320 Arabidopsis thaliana
AT1G53610 10.0kb downstream 10.0kb downstream 10325 true Chr1: 19998996-20009320 Arabidopsis thaliana
AT1G53610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19998996-20008995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495848 5273 Angiosperm View MSA
122478016 5272 Eudicot View MSA
122332146 5261 Brassicaceae View MSA
123773250 5264 Brassicales-Malvales View MSA
124271742 5266 SBM View MSA
124127701 5268 Malvidae View MSA
123856522 5270 Rosid View MSA
123442439 5271 Pentapetalae View MSA
120769209 5274 Embryophyte View MSA
122811578 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low Low
cufflinks 0.095     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.782        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.528       High

0 Strain