Gene : AT1G52980 A. thaliana TAIR10
Defline:  (1 of 1) K14537 - nuclear GTP-binding protein (NUG2, GNL2) Genomic Order:  4331
Name:  ? AT1G52980 Secondary Identifier:  ? PAC:19654772
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52980 0.5kb upstream 0.5kb upstream 3417 true Chr1: 19736932-19740348 Arabidopsis thaliana
AT1G52980 0.5kb upstream 0.5kb upstream 500 false Chr1: 19736932-19737431 Arabidopsis thaliana
AT1G52980 0.5kb downstream 0.5kb downstream 3417 true Chr1: 19737432-19740848 Arabidopsis thaliana
AT1G52980 0.5kb downstream 0.5kb downstream 500 false Chr1: 19740349-19740848 Arabidopsis thaliana
AT1G52980 1.0kb upstream 1.0kb upstream 3917 true Chr1: 19736432-19740348 Arabidopsis thaliana
AT1G52980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19736432-19737431 Arabidopsis thaliana
AT1G52980 1.0kb downstream 1.0kb downstream 3917 true Chr1: 19737432-19741348 Arabidopsis thaliana
AT1G52980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19740349-19741348 Arabidopsis thaliana
AT1G52980 2.0kb upstream 2.0kb upstream 4917 true Chr1: 19735432-19740348 Arabidopsis thaliana
AT1G52980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19735432-19737431 Arabidopsis thaliana
AT1G52980 2.0kb downstream 2.0kb downstream 4917 true Chr1: 19737432-19742348 Arabidopsis thaliana
AT1G52980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19740349-19742348 Arabidopsis thaliana
AT1G52980 5.0kb upstream 5.0kb upstream 7917 true Chr1: 19732432-19740348 Arabidopsis thaliana
AT1G52980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19732432-19737431 Arabidopsis thaliana
AT1G52980 5.0kb downstream 5.0kb downstream 7917 true Chr1: 19737432-19745348 Arabidopsis thaliana
AT1G52980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19740349-19745348 Arabidopsis thaliana
AT1G52980 10.0kb upstream 10.0kb upstream 12917 true Chr1: 19727432-19740348 Arabidopsis thaliana
AT1G52980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19727432-19737431 Arabidopsis thaliana
AT1G52980 10.0kb downstream 10.0kb downstream 12917 true Chr1: 19737432-19750348 Arabidopsis thaliana
AT1G52980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19740349-19750348 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040874 5273 Angiosperm View MSA
122372295 5261 Brassicaceae View MSA
123830842 5264 Brassicales-Malvales View MSA
124343716 5266 SBM View MSA
124241128 5268 Malvidae View MSA
124066525 5270 Rosid View MSA
123744991 5271 Pentapetalae View MSA
122793038 5272 Eudicot View MSA
121344616 5274 Embryophyte View MSA
123427861 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.946        
cufflinks 43.459     High  
cufflinks 28.309     High  
cufflinks 46.513     High High
cufflinks 25.05       Low
cufflinks 42.529     High  

0 Strain