Gene : AT1G52855 A. thaliana TAIR10
Genomic Order:  4319 Name:  ? AT1G52855
Secondary Identifier:  ? PAC:19653274
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52855 0.5kb upstream 0.5kb upstream 1053 true Chr1: 19682946-19683998 Arabidopsis thaliana
AT1G52855 0.5kb upstream 0.5kb upstream 500 false Chr1: 19683499-19683998 Arabidopsis thaliana
AT1G52855 0.5kb downstream 0.5kb downstream 1053 true Chr1: 19682446-19683498 Arabidopsis thaliana
AT1G52855 0.5kb downstream 0.5kb downstream 500 false Chr1: 19682446-19682945 Arabidopsis thaliana
AT1G52855 1.0kb upstream 1.0kb upstream 1553 true Chr1: 19682946-19684498 Arabidopsis thaliana
AT1G52855 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19683499-19684498 Arabidopsis thaliana
AT1G52855 1.0kb downstream 1.0kb downstream 1553 true Chr1: 19681946-19683498 Arabidopsis thaliana
AT1G52855 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19681946-19682945 Arabidopsis thaliana
AT1G52855 2.0kb upstream 2.0kb upstream 2553 true Chr1: 19682946-19685498 Arabidopsis thaliana
AT1G52855 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19683499-19685498 Arabidopsis thaliana
AT1G52855 2.0kb downstream 2.0kb downstream 2553 true Chr1: 19680946-19683498 Arabidopsis thaliana
AT1G52855 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19680946-19682945 Arabidopsis thaliana
AT1G52855 5.0kb upstream 5.0kb upstream 5553 true Chr1: 19682946-19688498 Arabidopsis thaliana
AT1G52855 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19683499-19688498 Arabidopsis thaliana
AT1G52855 5.0kb downstream 5.0kb downstream 5553 true Chr1: 19677946-19683498 Arabidopsis thaliana
AT1G52855 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19677946-19682945 Arabidopsis thaliana
AT1G52855 10.0kb upstream 10.0kb upstream 10553 true Chr1: 19682946-19693498 Arabidopsis thaliana
AT1G52855 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19683499-19693498 Arabidopsis thaliana
AT1G52855 10.0kb downstream 10.0kb downstream 10553 true Chr1: 19672946-19683498 Arabidopsis thaliana
AT1G52855 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19672946-19682945 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378963 5261 Brassicaceae View MSA
123840313 5264 Brassicales-Malvales View MSA
124346714 5266 SBM View MSA
124248892 5268 Malvidae View MSA
124074706 5270 Rosid View MSA
123747568 5271 Pentapetalae View MSA
122796436 5272 Eudicot View MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.741       High
cufflinks 0.248     Low Low
cufflinks 2.055        
cufflinks 0.63        
cufflinks 2.944        
cufflinks 0.598        

0 Strain