Gene : AT1G52530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12900 - MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 Genomic Order:  4283
Name:  ? AT1G52530 Secondary Identifier:  ? PAC:19651885
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52530 0.5kb upstream 0.5kb upstream 1971 true Chr1: 19568088-19570058 Arabidopsis thaliana
AT1G52530 0.5kb upstream 0.5kb upstream 500 false Chr1: 19568088-19568587 Arabidopsis thaliana
AT1G52530 0.5kb downstream 0.5kb downstream 1971 true Chr1: 19568588-19570558 Arabidopsis thaliana
AT1G52530 0.5kb downstream 0.5kb downstream 500 false Chr1: 19570059-19570558 Arabidopsis thaliana
AT1G52530 1.0kb upstream 1.0kb upstream 2471 true Chr1: 19567588-19570058 Arabidopsis thaliana
AT1G52530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19567588-19568587 Arabidopsis thaliana
AT1G52530 1.0kb downstream 1.0kb downstream 2471 true Chr1: 19568588-19571058 Arabidopsis thaliana
AT1G52530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19570059-19571058 Arabidopsis thaliana
AT1G52530 2.0kb upstream 2.0kb upstream 3471 true Chr1: 19566588-19570058 Arabidopsis thaliana
AT1G52530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19566588-19568587 Arabidopsis thaliana
AT1G52530 2.0kb downstream 2.0kb downstream 3471 true Chr1: 19568588-19572058 Arabidopsis thaliana
AT1G52530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19570059-19572058 Arabidopsis thaliana
AT1G52530 5.0kb upstream 5.0kb upstream 6471 true Chr1: 19563588-19570058 Arabidopsis thaliana
AT1G52530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19563588-19568587 Arabidopsis thaliana
AT1G52530 5.0kb downstream 5.0kb downstream 6471 true Chr1: 19568588-19575058 Arabidopsis thaliana
AT1G52530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19570059-19575058 Arabidopsis thaliana
AT1G52530 10.0kb upstream 10.0kb upstream 11471 true Chr1: 19558588-19570058 Arabidopsis thaliana
AT1G52530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19558588-19568587 Arabidopsis thaliana
AT1G52530 10.0kb downstream 10.0kb downstream 11471 true Chr1: 19568588-19580058 Arabidopsis thaliana
AT1G52530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19570059-19580058 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372215 5261 Brassicaceae View MSA
123834150 5264 Brassicales-Malvales View MSA
124338312 5266 SBM View MSA
124238917 5268 Malvidae View MSA
124067881 5270 Rosid View MSA
123737644 5271 Pentapetalae View MSA
122786635 5272 Eudicot View MSA
122044274 5273 Angiosperm View MSA
121346452 5274 Embryophyte View MSA
123425931 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69        
cufflinks 1.917        
cufflinks 0.415       Low
cufflinks 1.708        
cufflinks 0.38       Low
cufflinks 1.925        

0 Strain