Gene : TSA1 A. thaliana TAIR10
Primary Identifier:  ? AT1G52410 Defline:  (1 of 3) KOG3133 - 40 kDa farnesylated protein associated with peroxisomes
Genomic Order:  4271 Name:  ? AT1G52410
Secondary Identifier:  ? PAC:19655227
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52410 0.5kb upstream 0.5kb upstream 5397 true Chr1: 19520228-19525624 Arabidopsis thaliana
AT1G52410 0.5kb upstream 0.5kb upstream 500 false Chr1: 19520228-19520727 Arabidopsis thaliana
AT1G52410 0.5kb downstream 0.5kb downstream 5397 true Chr1: 19520728-19526124 Arabidopsis thaliana
AT1G52410 0.5kb downstream 0.5kb downstream 500 false Chr1: 19525625-19526124 Arabidopsis thaliana
AT1G52410 1.0kb upstream 1.0kb upstream 5897 true Chr1: 19519728-19525624 Arabidopsis thaliana
AT1G52410 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19519728-19520727 Arabidopsis thaliana
AT1G52410 1.0kb downstream 1.0kb downstream 5897 true Chr1: 19520728-19526624 Arabidopsis thaliana
AT1G52410 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19525625-19526624 Arabidopsis thaliana
AT1G52410 2.0kb upstream 2.0kb upstream 6897 true Chr1: 19518728-19525624 Arabidopsis thaliana
AT1G52410 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19518728-19520727 Arabidopsis thaliana
AT1G52410 2.0kb downstream 2.0kb downstream 6897 true Chr1: 19520728-19527624 Arabidopsis thaliana
AT1G52410 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19525625-19527624 Arabidopsis thaliana
AT1G52410 5.0kb upstream 5.0kb upstream 9897 true Chr1: 19515728-19525624 Arabidopsis thaliana
AT1G52410 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19515728-19520727 Arabidopsis thaliana
AT1G52410 5.0kb downstream 5.0kb downstream 9897 true Chr1: 19520728-19530624 Arabidopsis thaliana
AT1G52410 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19525625-19530624 Arabidopsis thaliana
AT1G52410 10.0kb upstream 10.0kb upstream 14897 true Chr1: 19510728-19525624 Arabidopsis thaliana
AT1G52410 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19510728-19520727 Arabidopsis thaliana
AT1G52410 10.0kb downstream 10.0kb downstream 14897 true Chr1: 19520728-19535624 Arabidopsis thaliana
AT1G52410 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19525625-19535624 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511618 5273 Angiosperm View MSA
122377798 5261 Brassicaceae View MSA
123801640 5264 Brassicales-Malvales View MSA
124298918 5266 SBM View MSA
124150454 5268 Malvidae View MSA
123876061 5270 Rosid View MSA
123459787 5271 Pentapetalae View MSA
122495172 5272 Eudicot View MSA
120784659 5274 Embryophyte View MSA
122826558 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.778        
cufflinks 11.706        
cufflinks 14.83        
cufflinks 13.525        
cufflinks 22.907       High
cufflinks 5.852       Low

0 Strain