Gene : AT1G52380 A. thaliana TAIR10
Defline:  (1 of 2) K15304 - Ran-binding protein 3 (RANBP3) Genomic Order:  4268
Name:  ? AT1G52380 Secondary Identifier:  ? PAC:19649185
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52380 0.5kb upstream 0.5kb upstream 3057 true Chr1: 19508483-19511539 Arabidopsis thaliana
AT1G52380 0.5kb upstream 0.5kb upstream 500 false Chr1: 19508483-19508982 Arabidopsis thaliana
AT1G52380 0.5kb downstream 0.5kb downstream 3057 true Chr1: 19508983-19512039 Arabidopsis thaliana
AT1G52380 0.5kb downstream 0.5kb downstream 500 false Chr1: 19511540-19512039 Arabidopsis thaliana
AT1G52380 1.0kb upstream 1.0kb upstream 3557 true Chr1: 19507983-19511539 Arabidopsis thaliana
AT1G52380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19507983-19508982 Arabidopsis thaliana
AT1G52380 1.0kb downstream 1.0kb downstream 3557 true Chr1: 19508983-19512539 Arabidopsis thaliana
AT1G52380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19511540-19512539 Arabidopsis thaliana
AT1G52380 2.0kb upstream 2.0kb upstream 4557 true Chr1: 19506983-19511539 Arabidopsis thaliana
AT1G52380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19506983-19508982 Arabidopsis thaliana
AT1G52380 2.0kb downstream 2.0kb downstream 4557 true Chr1: 19508983-19513539 Arabidopsis thaliana
AT1G52380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19511540-19513539 Arabidopsis thaliana
AT1G52380 5.0kb upstream 5.0kb upstream 7557 true Chr1: 19503983-19511539 Arabidopsis thaliana
AT1G52380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19503983-19508982 Arabidopsis thaliana
AT1G52380 5.0kb downstream 5.0kb downstream 7557 true Chr1: 19508983-19516539 Arabidopsis thaliana
AT1G52380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19511540-19516539 Arabidopsis thaliana
AT1G52380 10.0kb upstream 10.0kb upstream 12557 true Chr1: 19498983-19511539 Arabidopsis thaliana
AT1G52380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19498983-19508982 Arabidopsis thaliana
AT1G52380 10.0kb downstream 10.0kb downstream 12557 true Chr1: 19508983-19521539 Arabidopsis thaliana
AT1G52380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19511540-19521539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372823 5261 Brassicaceae View MSA
123841185 5264 Brassicales-Malvales View MSA
124342179 5266 SBM View MSA
124250463 5268 Malvidae View MSA
124064858 5270 Rosid View MSA
123747182 5271 Pentapetalae View MSA
122787739 5272 Eudicot View MSA
122041573 5273 Angiosperm View MSA
121345914 5274 Embryophyte View MSA
123427717 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.969        
cufflinks 17.541        
cufflinks 12.2       Low
cufflinks 17.847        
cufflinks 11.785       Low
cufflinks 19.509       High

0 Strain