Gene : RABG3d A. thaliana TAIR10
Primary Identifier:  ? AT1G52280 Defline:  (1 of 2) PTHR24073//PTHR24073:SF502 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3D
Genomic Order:  4255 Name:  ? AT1G52280
Secondary Identifier:  ? PAC:19658241
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52280 0.5kb upstream 0.5kb upstream 2118 true Chr1: 19467969-19470086 Arabidopsis thaliana
AT1G52280 0.5kb upstream 0.5kb upstream 500 false Chr1: 19469587-19470086 Arabidopsis thaliana
AT1G52280 0.5kb downstream 0.5kb downstream 2118 true Chr1: 19467469-19469586 Arabidopsis thaliana
AT1G52280 0.5kb downstream 0.5kb downstream 500 false Chr1: 19467469-19467968 Arabidopsis thaliana
AT1G52280 1.0kb upstream 1.0kb upstream 2618 true Chr1: 19467969-19470586 Arabidopsis thaliana
AT1G52280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19469587-19470586 Arabidopsis thaliana
AT1G52280 1.0kb downstream 1.0kb downstream 2618 true Chr1: 19466969-19469586 Arabidopsis thaliana
AT1G52280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19466969-19467968 Arabidopsis thaliana
AT1G52280 2.0kb upstream 2.0kb upstream 3618 true Chr1: 19467969-19471586 Arabidopsis thaliana
AT1G52280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19469587-19471586 Arabidopsis thaliana
AT1G52280 2.0kb downstream 2.0kb downstream 3618 true Chr1: 19465969-19469586 Arabidopsis thaliana
AT1G52280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19465969-19467968 Arabidopsis thaliana
AT1G52280 5.0kb upstream 5.0kb upstream 6618 true Chr1: 19467969-19474586 Arabidopsis thaliana
AT1G52280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19469587-19474586 Arabidopsis thaliana
AT1G52280 5.0kb downstream 5.0kb downstream 6618 true Chr1: 19462969-19469586 Arabidopsis thaliana
AT1G52280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19462969-19467968 Arabidopsis thaliana
AT1G52280 10.0kb upstream 10.0kb upstream 11618 true Chr1: 19467969-19479586 Arabidopsis thaliana
AT1G52280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19469587-19479586 Arabidopsis thaliana
AT1G52280 10.0kb downstream 10.0kb downstream 11618 true Chr1: 19457969-19469586 Arabidopsis thaliana
AT1G52280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19457969-19467968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380150 5261 Brassicaceae View MSA
123837674 5264 Brassicales-Malvales View MSA
124337885 5266 SBM View MSA
124244922 5268 Malvidae View MSA
124066857 5270 Rosid View MSA
123747351 5271 Pentapetalae View MSA
122788810 5272 Eudicot View MSA
122045905 5273 Angiosperm View MSA
121346139 5274 Embryophyte View MSA
123428256 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.531        
cufflinks 40.827     High  
cufflinks 16.178        
cufflinks 34.52     High  
cufflinks 14.077       Low
cufflinks 50.702     High High

0 Strain