Gene : AT1G52342 A. thaliana TAIR10
Genomic Order:  4264 Name:  ? AT1G52342
Secondary Identifier:  ? PAC:19656109
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52342 0.5kb upstream 0.5kb upstream 1015 true Chr1: 19492255-19493269 Arabidopsis thaliana
AT1G52342 0.5kb upstream 0.5kb upstream 500 false Chr1: 19492770-19493269 Arabidopsis thaliana
AT1G52342 0.5kb downstream 0.5kb downstream 1015 true Chr1: 19491755-19492769 Arabidopsis thaliana
AT1G52342 0.5kb downstream 0.5kb downstream 500 false Chr1: 19491755-19492254 Arabidopsis thaliana
AT1G52342 1.0kb upstream 1.0kb upstream 1515 true Chr1: 19492255-19493769 Arabidopsis thaliana
AT1G52342 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19492770-19493769 Arabidopsis thaliana
AT1G52342 1.0kb downstream 1.0kb downstream 1515 true Chr1: 19491255-19492769 Arabidopsis thaliana
AT1G52342 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19491255-19492254 Arabidopsis thaliana
AT1G52342 2.0kb upstream 2.0kb upstream 2515 true Chr1: 19492255-19494769 Arabidopsis thaliana
AT1G52342 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19492770-19494769 Arabidopsis thaliana
AT1G52342 2.0kb downstream 2.0kb downstream 2515 true Chr1: 19490255-19492769 Arabidopsis thaliana
AT1G52342 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19490255-19492254 Arabidopsis thaliana
AT1G52342 5.0kb upstream 5.0kb upstream 5515 true Chr1: 19492255-19497769 Arabidopsis thaliana
AT1G52342 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19492770-19497769 Arabidopsis thaliana
AT1G52342 5.0kb downstream 5.0kb downstream 5515 true Chr1: 19487255-19492769 Arabidopsis thaliana
AT1G52342 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19487255-19492254 Arabidopsis thaliana
AT1G52342 10.0kb upstream 10.0kb upstream 10515 true Chr1: 19492255-19502769 Arabidopsis thaliana
AT1G52342 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19492770-19502769 Arabidopsis thaliana
AT1G52342 10.0kb downstream 10.0kb downstream 10515 true Chr1: 19482255-19492769 Arabidopsis thaliana
AT1G52342 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19482255-19492254 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371457 5261 Brassicaceae View MSA
123835590 5264 Brassicales-Malvales View MSA
124322066 5266 SBM View MSA
124247650 5268 Malvidae View MSA
124050861 5270 Rosid View MSA
123751117 5271 Pentapetalae View MSA
122794336 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.624        
cufflinks 1.091        
cufflinks 23.843        
cufflinks 4.96        
cufflinks 28.401     High  
cufflinks 0.425       Low

0 Strain