Gene : MBP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G52030 Defline:  (1 of 39) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED
Genomic Order:  4232 Name:  ? AT1G52030
Secondary Identifier:  ? PAC:19654722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52030 0.5kb upstream 0.5kb upstream 3649 true Chr1: 19345940-19349588 Arabidopsis thaliana
AT1G52030 0.5kb upstream 0.5kb upstream 500 false Chr1: 19349089-19349588 Arabidopsis thaliana
AT1G52030 0.5kb downstream 0.5kb downstream 3649 true Chr1: 19345440-19349088 Arabidopsis thaliana
AT1G52030 0.5kb downstream 0.5kb downstream 500 false Chr1: 19345440-19345939 Arabidopsis thaliana
AT1G52030 1.0kb upstream 1.0kb upstream 4149 true Chr1: 19345940-19350088 Arabidopsis thaliana
AT1G52030 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19349089-19350088 Arabidopsis thaliana
AT1G52030 1.0kb downstream 1.0kb downstream 4149 true Chr1: 19344940-19349088 Arabidopsis thaliana
AT1G52030 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19344940-19345939 Arabidopsis thaliana
AT1G52030 2.0kb upstream 2.0kb upstream 5149 true Chr1: 19345940-19351088 Arabidopsis thaliana
AT1G52030 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19349089-19351088 Arabidopsis thaliana
AT1G52030 2.0kb downstream 2.0kb downstream 5149 true Chr1: 19343940-19349088 Arabidopsis thaliana
AT1G52030 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19343940-19345939 Arabidopsis thaliana
AT1G52030 5.0kb upstream 5.0kb upstream 8149 true Chr1: 19345940-19354088 Arabidopsis thaliana
AT1G52030 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19349089-19354088 Arabidopsis thaliana
AT1G52030 5.0kb downstream 5.0kb downstream 8149 true Chr1: 19340940-19349088 Arabidopsis thaliana
AT1G52030 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19340940-19345939 Arabidopsis thaliana
AT1G52030 10.0kb upstream 10.0kb upstream 13149 true Chr1: 19345940-19359088 Arabidopsis thaliana
AT1G52030 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19349089-19359088 Arabidopsis thaliana
AT1G52030 10.0kb downstream 10.0kb downstream 13149 true Chr1: 19335940-19349088 Arabidopsis thaliana
AT1G52030 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19335940-19345939 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381416 5261 Brassicaceae View MSA
123803233 5264 Brassicales-Malvales View MSA
124300358 5266 SBM View MSA
124151556 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.995        
cufflinks 0.358       Low
cufflinks 2.745        
cufflinks 2.016        
cufflinks 5.263        
cufflinks 0.263     Low Low

0 Strain