Gene : AT1G51940 A. thaliana TAIR10
Defline:  (1 of 1) PTHR27001//PTHR27001:SF102 - FAMILY NOT NAMED // LYSM DOMAIN RECEPTOR-LIKE KINASE 3 Genomic Order:  4224
Name:  ? AT1G51940 Secondary Identifier:  ? PAC:19658004
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51940 0.5kb upstream 0.5kb upstream 3715 true Chr1: 19295904-19299618 Arabidopsis thaliana
AT1G51940 0.5kb upstream 0.5kb upstream 500 false Chr1: 19299119-19299618 Arabidopsis thaliana
AT1G51940 0.5kb downstream 0.5kb downstream 3715 true Chr1: 19295404-19299118 Arabidopsis thaliana
AT1G51940 0.5kb downstream 0.5kb downstream 500 false Chr1: 19295404-19295903 Arabidopsis thaliana
AT1G51940 1.0kb upstream 1.0kb upstream 4215 true Chr1: 19295904-19300118 Arabidopsis thaliana
AT1G51940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19299119-19300118 Arabidopsis thaliana
AT1G51940 1.0kb downstream 1.0kb downstream 4215 true Chr1: 19294904-19299118 Arabidopsis thaliana
AT1G51940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19294904-19295903 Arabidopsis thaliana
AT1G51940 2.0kb upstream 2.0kb upstream 5215 true Chr1: 19295904-19301118 Arabidopsis thaliana
AT1G51940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19299119-19301118 Arabidopsis thaliana
AT1G51940 2.0kb downstream 2.0kb downstream 5215 true Chr1: 19293904-19299118 Arabidopsis thaliana
AT1G51940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19293904-19295903 Arabidopsis thaliana
AT1G51940 5.0kb upstream 5.0kb upstream 8215 true Chr1: 19295904-19304118 Arabidopsis thaliana
AT1G51940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19299119-19304118 Arabidopsis thaliana
AT1G51940 5.0kb downstream 5.0kb downstream 8215 true Chr1: 19290904-19299118 Arabidopsis thaliana
AT1G51940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19290904-19295903 Arabidopsis thaliana
AT1G51940 10.0kb upstream 10.0kb upstream 13215 true Chr1: 19295904-19309118 Arabidopsis thaliana
AT1G51940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19299119-19309118 Arabidopsis thaliana
AT1G51940 10.0kb downstream 10.0kb downstream 13215 true Chr1: 19285904-19299118 Arabidopsis thaliana
AT1G51940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19285904-19295903 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372282 5261 Brassicaceae View MSA
123831330 5264 Brassicales-Malvales View MSA
124341483 5266 SBM View MSA
124243178 5268 Malvidae View MSA
124073065 5270 Rosid View MSA
123749513 5271 Pentapetalae View MSA
122797060 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.67     High High
cufflinks 5.345       Low
cufflinks 21.54        
cufflinks 6.361        
cufflinks 26.972     High  
cufflinks 8.278        

0 Strain