Gene : UBP6 A. thaliana TAIR10
Primary Identifier:  ? AT1G51710 Defline:  (1 of 2) K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6)
Genomic Order:  4197 Name:  ? AT1G51710
Secondary Identifier:  ? PAC:19649538
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51710 0.5kb upstream 0.5kb upstream 4826 true Chr1: 19175642-19180467 Arabidopsis thaliana
AT1G51710 0.5kb upstream 0.5kb upstream 500 false Chr1: 19179968-19180467 Arabidopsis thaliana
AT1G51710 0.5kb downstream 0.5kb downstream 4826 true Chr1: 19175142-19179967 Arabidopsis thaliana
AT1G51710 0.5kb downstream 0.5kb downstream 500 false Chr1: 19175142-19175641 Arabidopsis thaliana
AT1G51710 1.0kb upstream 1.0kb upstream 5326 true Chr1: 19175642-19180967 Arabidopsis thaliana
AT1G51710 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19179968-19180967 Arabidopsis thaliana
AT1G51710 1.0kb downstream 1.0kb downstream 5326 true Chr1: 19174642-19179967 Arabidopsis thaliana
AT1G51710 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19174642-19175641 Arabidopsis thaliana
AT1G51710 2.0kb upstream 2.0kb upstream 6326 true Chr1: 19175642-19181967 Arabidopsis thaliana
AT1G51710 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19179968-19181967 Arabidopsis thaliana
AT1G51710 2.0kb downstream 2.0kb downstream 6326 true Chr1: 19173642-19179967 Arabidopsis thaliana
AT1G51710 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19173642-19175641 Arabidopsis thaliana
AT1G51710 5.0kb upstream 5.0kb upstream 9326 true Chr1: 19175642-19184967 Arabidopsis thaliana
AT1G51710 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19179968-19184967 Arabidopsis thaliana
AT1G51710 5.0kb downstream 5.0kb downstream 9326 true Chr1: 19170642-19179967 Arabidopsis thaliana
AT1G51710 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19170642-19175641 Arabidopsis thaliana
AT1G51710 10.0kb upstream 10.0kb upstream 14326 true Chr1: 19175642-19189967 Arabidopsis thaliana
AT1G51710 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19179968-19189967 Arabidopsis thaliana
AT1G51710 10.0kb downstream 10.0kb downstream 14326 true Chr1: 19165642-19179967 Arabidopsis thaliana
AT1G51710 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19165642-19175641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360361 5261 Brassicaceae View MSA
123832659 5264 Brassicales-Malvales View MSA
124340718 5266 SBM View MSA
124244727 5268 Malvidae View MSA
124066467 5270 Rosid View MSA
123739899 5271 Pentapetalae View MSA
122787327 5272 Eudicot View MSA
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.079        
cufflinks 9.788        
cufflinks 7.354       Low
cufflinks 11.09        
cufflinks 8.275        
cufflinks 11.769       High

0 Strain