Gene : AT1G51570 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10024//PTHR10024:SF243 - SYNAPTOTAGMIN // ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  4183
Name:  ? AT1G51570 Secondary Identifier:  ? PAC:19656000
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51570 0.5kb upstream 0.5kb upstream 3019 true Chr1: 19122170-19125188 Arabidopsis thaliana
AT1G51570 0.5kb upstream 0.5kb upstream 500 false Chr1: 19124689-19125188 Arabidopsis thaliana
AT1G51570 0.5kb downstream 0.5kb downstream 3019 true Chr1: 19121670-19124688 Arabidopsis thaliana
AT1G51570 0.5kb downstream 0.5kb downstream 500 false Chr1: 19121670-19122169 Arabidopsis thaliana
AT1G51570 1.0kb upstream 1.0kb upstream 3519 true Chr1: 19122170-19125688 Arabidopsis thaliana
AT1G51570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19124689-19125688 Arabidopsis thaliana
AT1G51570 1.0kb downstream 1.0kb downstream 3519 true Chr1: 19121170-19124688 Arabidopsis thaliana
AT1G51570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19121170-19122169 Arabidopsis thaliana
AT1G51570 2.0kb upstream 2.0kb upstream 4519 true Chr1: 19122170-19126688 Arabidopsis thaliana
AT1G51570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19124689-19126688 Arabidopsis thaliana
AT1G51570 2.0kb downstream 2.0kb downstream 4519 true Chr1: 19120170-19124688 Arabidopsis thaliana
AT1G51570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19120170-19122169 Arabidopsis thaliana
AT1G51570 5.0kb upstream 5.0kb upstream 7519 true Chr1: 19122170-19129688 Arabidopsis thaliana
AT1G51570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19124689-19129688 Arabidopsis thaliana
AT1G51570 5.0kb downstream 5.0kb downstream 7519 true Chr1: 19117170-19124688 Arabidopsis thaliana
AT1G51570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19117170-19122169 Arabidopsis thaliana
AT1G51570 10.0kb upstream 10.0kb upstream 12519 true Chr1: 19122170-19134688 Arabidopsis thaliana
AT1G51570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19124689-19134688 Arabidopsis thaliana
AT1G51570 10.0kb downstream 10.0kb downstream 12519 true Chr1: 19112170-19124688 Arabidopsis thaliana
AT1G51570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19112170-19122169 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376326 5261 Brassicaceae View MSA
123801209 5264 Brassicales-Malvales View MSA
124298539 5266 SBM View MSA
124251050 5268 Malvidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.798     High High
cufflinks 39.242     High Low
cufflinks 63.014     High  
cufflinks 39.877     High Low
cufflinks 55.913     High  
cufflinks 47.058     High  

0 Strain