Gene : AT1G51538 A. thaliana TAIR10
Defline:  (1 of 9) PTHR16007//PTHR16007:SF20 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // AMINOTRANSFERASE-LIKE, PLANT MOBILE DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  4179
Name:  ? AT1G51538 Secondary Identifier:  ? PAC:19656993
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51538 0.5kb upstream 0.5kb upstream 2591 true Chr1: 19112683-19115273 Arabidopsis thaliana
AT1G51538 0.5kb upstream 0.5kb upstream 500 false Chr1: 19112683-19113182 Arabidopsis thaliana
AT1G51538 0.5kb downstream 0.5kb downstream 2591 true Chr1: 19113183-19115773 Arabidopsis thaliana
AT1G51538 0.5kb downstream 0.5kb downstream 500 false Chr1: 19115274-19115773 Arabidopsis thaliana
AT1G51538 1.0kb upstream 1.0kb upstream 3091 true Chr1: 19112183-19115273 Arabidopsis thaliana
AT1G51538 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19112183-19113182 Arabidopsis thaliana
AT1G51538 1.0kb downstream 1.0kb downstream 3091 true Chr1: 19113183-19116273 Arabidopsis thaliana
AT1G51538 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19115274-19116273 Arabidopsis thaliana
AT1G51538 2.0kb upstream 2.0kb upstream 4091 true Chr1: 19111183-19115273 Arabidopsis thaliana
AT1G51538 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19111183-19113182 Arabidopsis thaliana
AT1G51538 2.0kb downstream 2.0kb downstream 4091 true Chr1: 19113183-19117273 Arabidopsis thaliana
AT1G51538 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19115274-19117273 Arabidopsis thaliana
AT1G51538 5.0kb upstream 5.0kb upstream 7091 true Chr1: 19108183-19115273 Arabidopsis thaliana
AT1G51538 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19108183-19113182 Arabidopsis thaliana
AT1G51538 5.0kb downstream 5.0kb downstream 7091 true Chr1: 19113183-19120273 Arabidopsis thaliana
AT1G51538 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19115274-19120273 Arabidopsis thaliana
AT1G51538 10.0kb upstream 10.0kb upstream 12091 true Chr1: 19103183-19115273 Arabidopsis thaliana
AT1G51538 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19103183-19113182 Arabidopsis thaliana
AT1G51538 10.0kb downstream 10.0kb downstream 12091 true Chr1: 19113183-19125273 Arabidopsis thaliana
AT1G51538 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19115274-19125273 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
122380471 5261 Brassicaceae View MSA
123802734 5264 Brassicales-Malvales View MSA
124299902 5266 SBM View MSA
124151205 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.076     Low  
cufflinks 0.145     Low  
cufflinks 0.063     Low  
cufflinks 0.2     Low High
cufflinks 0.03     Low Low
cufflinks 0.128     Low  

0 Strain