Gene : AT1G51160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23249//PTHR23249:SF16 - SYNBINDIN // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 Genomic Order:  4139
Name:  ? AT1G51160 Secondary Identifier:  ? PAC:19653564
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51160 0.5kb upstream 0.5kb upstream 2693 true Chr1: 18949091-18951783 Arabidopsis thaliana
AT1G51160 0.5kb upstream 0.5kb upstream 500 false Chr1: 18949091-18949590 Arabidopsis thaliana
AT1G51160 0.5kb downstream 0.5kb downstream 2693 true Chr1: 18949591-18952283 Arabidopsis thaliana
AT1G51160 0.5kb downstream 0.5kb downstream 500 false Chr1: 18951784-18952283 Arabidopsis thaliana
AT1G51160 1.0kb upstream 1.0kb upstream 3193 true Chr1: 18948591-18951783 Arabidopsis thaliana
AT1G51160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18948591-18949590 Arabidopsis thaliana
AT1G51160 1.0kb downstream 1.0kb downstream 3193 true Chr1: 18949591-18952783 Arabidopsis thaliana
AT1G51160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18951784-18952783 Arabidopsis thaliana
AT1G51160 2.0kb upstream 2.0kb upstream 4193 true Chr1: 18947591-18951783 Arabidopsis thaliana
AT1G51160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18947591-18949590 Arabidopsis thaliana
AT1G51160 2.0kb downstream 2.0kb downstream 4193 true Chr1: 18949591-18953783 Arabidopsis thaliana
AT1G51160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18951784-18953783 Arabidopsis thaliana
AT1G51160 5.0kb upstream 5.0kb upstream 7193 true Chr1: 18944591-18951783 Arabidopsis thaliana
AT1G51160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18944591-18949590 Arabidopsis thaliana
AT1G51160 5.0kb downstream 5.0kb downstream 7193 true Chr1: 18949591-18956783 Arabidopsis thaliana
AT1G51160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18951784-18956783 Arabidopsis thaliana
AT1G51160 10.0kb upstream 10.0kb upstream 12193 true Chr1: 18939591-18951783 Arabidopsis thaliana
AT1G51160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18939591-18949590 Arabidopsis thaliana
AT1G51160 10.0kb downstream 10.0kb downstream 12193 true Chr1: 18949591-18961783 Arabidopsis thaliana
AT1G51160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18951784-18961783 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026490 5273 Angiosperm View MSA
122364502 5261 Brassicaceae View MSA
123832778 5264 Brassicales-Malvales View MSA
124342262 5266 SBM View MSA
124240430 5268 Malvidae View MSA
124068318 5270 Rosid View MSA
123752439 5271 Pentapetalae View MSA
122794769 5272 Eudicot View MSA
121344291 5274 Embryophyte View MSA
123427363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.749        
cufflinks 10.846        
cufflinks 6.153       Low
cufflinks 11.774       High
cufflinks 6.449        
cufflinks 11.631        

0 Strain