Gene : AT1G50740 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12668//PTHR12668:SF0 - TRANSMEMBRANE PROTEIN 14, 15 // UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  4098
Name:  ? AT1G50740 Secondary Identifier:  ? PAC:19650495
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50740 0.5kb upstream 0.5kb upstream 1833 true Chr1: 18807172-18809004 Arabidopsis thaliana
AT1G50740 0.5kb upstream 0.5kb upstream 500 false Chr1: 18807172-18807671 Arabidopsis thaliana
AT1G50740 0.5kb downstream 0.5kb downstream 1833 true Chr1: 18807672-18809504 Arabidopsis thaliana
AT1G50740 0.5kb downstream 0.5kb downstream 500 false Chr1: 18809005-18809504 Arabidopsis thaliana
AT1G50740 1.0kb upstream 1.0kb upstream 2333 true Chr1: 18806672-18809004 Arabidopsis thaliana
AT1G50740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18806672-18807671 Arabidopsis thaliana
AT1G50740 1.0kb downstream 1.0kb downstream 2333 true Chr1: 18807672-18810004 Arabidopsis thaliana
AT1G50740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18809005-18810004 Arabidopsis thaliana
AT1G50740 2.0kb upstream 2.0kb upstream 3333 true Chr1: 18805672-18809004 Arabidopsis thaliana
AT1G50740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18805672-18807671 Arabidopsis thaliana
AT1G50740 2.0kb downstream 2.0kb downstream 3333 true Chr1: 18807672-18811004 Arabidopsis thaliana
AT1G50740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18809005-18811004 Arabidopsis thaliana
AT1G50740 5.0kb upstream 5.0kb upstream 6333 true Chr1: 18802672-18809004 Arabidopsis thaliana
AT1G50740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18802672-18807671 Arabidopsis thaliana
AT1G50740 5.0kb downstream 5.0kb downstream 6333 true Chr1: 18807672-18814004 Arabidopsis thaliana
AT1G50740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18809005-18814004 Arabidopsis thaliana
AT1G50740 10.0kb upstream 10.0kb upstream 11333 true Chr1: 18797672-18809004 Arabidopsis thaliana
AT1G50740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18797672-18807671 Arabidopsis thaliana
AT1G50740 10.0kb downstream 10.0kb downstream 11333 true Chr1: 18807672-18819004 Arabidopsis thaliana
AT1G50740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18809005-18819004 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375911 5261 Brassicaceae View MSA
123840061 5264 Brassicales-Malvales View MSA
124344011 5266 SBM View MSA
124242311 5268 Malvidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.654        
cufflinks 123.677     High High
cufflinks 14.202       Low
cufflinks 83.213     High  
cufflinks 18.695        
cufflinks 101.947     High  

0 Strain