Gene : AT1G50830 A. thaliana TAIR10
Defline:  (1 of 9) PTHR16007//PTHR16007:SF20 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // AMINOTRANSFERASE-LIKE, PLANT MOBILE DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  4106
Name:  ? AT1G50830 Secondary Identifier:  ? PAC:19651688
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50830 0.5kb upstream 0.5kb upstream 3172 true Chr1: 18835271-18838442 Arabidopsis thaliana
AT1G50830 0.5kb upstream 0.5kb upstream 500 false Chr1: 18837943-18838442 Arabidopsis thaliana
AT1G50830 0.5kb downstream 0.5kb downstream 3172 true Chr1: 18834771-18837942 Arabidopsis thaliana
AT1G50830 0.5kb downstream 0.5kb downstream 500 false Chr1: 18834771-18835270 Arabidopsis thaliana
AT1G50830 1.0kb upstream 1.0kb upstream 3672 true Chr1: 18835271-18838942 Arabidopsis thaliana
AT1G50830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18837943-18838942 Arabidopsis thaliana
AT1G50830 1.0kb downstream 1.0kb downstream 3672 true Chr1: 18834271-18837942 Arabidopsis thaliana
AT1G50830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18834271-18835270 Arabidopsis thaliana
AT1G50830 2.0kb upstream 2.0kb upstream 4672 true Chr1: 18835271-18839942 Arabidopsis thaliana
AT1G50830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18837943-18839942 Arabidopsis thaliana
AT1G50830 2.0kb downstream 2.0kb downstream 4672 true Chr1: 18833271-18837942 Arabidopsis thaliana
AT1G50830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18833271-18835270 Arabidopsis thaliana
AT1G50830 5.0kb upstream 5.0kb upstream 7672 true Chr1: 18835271-18842942 Arabidopsis thaliana
AT1G50830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18837943-18842942 Arabidopsis thaliana
AT1G50830 5.0kb downstream 5.0kb downstream 7672 true Chr1: 18830271-18837942 Arabidopsis thaliana
AT1G50830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18830271-18835270 Arabidopsis thaliana
AT1G50830 10.0kb upstream 10.0kb upstream 12672 true Chr1: 18835271-18847942 Arabidopsis thaliana
AT1G50830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18837943-18847942 Arabidopsis thaliana
AT1G50830 10.0kb downstream 10.0kb downstream 12672 true Chr1: 18825271-18837942 Arabidopsis thaliana
AT1G50830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18825271-18835270 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
122378177 5261 Brassicaceae View MSA
123801773 5264 Brassicales-Malvales View MSA
124299039 5266 SBM View MSA
124250657 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.085     Low Low
cufflinks 0.289     Low High
cufflinks 0.091     Low Low
cufflinks 0.214     Low  
cufflinks 0.128     Low  
cufflinks 0.236     Low  

0 Strain