Gene : AT1G50630 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31963//PTHR31963:SF4 - FAMILY NOT NAMED // F11F12.5 PROTEIN Genomic Order:  4085
Name:  ? AT1G50630 Secondary Identifier:  ? PAC:19654354
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50630 0.5kb upstream 0.5kb upstream 2714 true Chr1: 18751456-18754169 Arabidopsis thaliana
AT1G50630 0.5kb upstream 0.5kb upstream 500 false Chr1: 18753670-18754169 Arabidopsis thaliana
AT1G50630 0.5kb downstream 0.5kb downstream 2714 true Chr1: 18750956-18753669 Arabidopsis thaliana
AT1G50630 0.5kb downstream 0.5kb downstream 500 false Chr1: 18750956-18751455 Arabidopsis thaliana
AT1G50630 1.0kb upstream 1.0kb upstream 3214 true Chr1: 18751456-18754669 Arabidopsis thaliana
AT1G50630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18753670-18754669 Arabidopsis thaliana
AT1G50630 1.0kb downstream 1.0kb downstream 3214 true Chr1: 18750456-18753669 Arabidopsis thaliana
AT1G50630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18750456-18751455 Arabidopsis thaliana
AT1G50630 2.0kb upstream 2.0kb upstream 4214 true Chr1: 18751456-18755669 Arabidopsis thaliana
AT1G50630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18753670-18755669 Arabidopsis thaliana
AT1G50630 2.0kb downstream 2.0kb downstream 4214 true Chr1: 18749456-18753669 Arabidopsis thaliana
AT1G50630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18749456-18751455 Arabidopsis thaliana
AT1G50630 5.0kb upstream 5.0kb upstream 7214 true Chr1: 18751456-18758669 Arabidopsis thaliana
AT1G50630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18753670-18758669 Arabidopsis thaliana
AT1G50630 5.0kb downstream 5.0kb downstream 7214 true Chr1: 18746456-18753669 Arabidopsis thaliana
AT1G50630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18746456-18751455 Arabidopsis thaliana
AT1G50630 10.0kb upstream 10.0kb upstream 12214 true Chr1: 18751456-18763669 Arabidopsis thaliana
AT1G50630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18753670-18763669 Arabidopsis thaliana
AT1G50630 10.0kb downstream 10.0kb downstream 12214 true Chr1: 18741456-18753669 Arabidopsis thaliana
AT1G50630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18741456-18751455 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
122373938 5261 Brassicaceae View MSA
123800649 5264 Brassicales-Malvales View MSA
124298039 5266 SBM View MSA
124251317 5268 Malvidae View MSA
124067950 5270 Rosid View MSA
123751091 5271 Pentapetalae View MSA
122792359 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.503        
cufflinks 6.447        
cufflinks 2.013        
cufflinks 7.219        
cufflinks 1.847       Low
cufflinks 9.444       High

0 Strain