Gene : CPK33 A. thaliana TAIR10
Primary Identifier:  ? AT1G50700 Defline:  (1 of 4) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29
Genomic Order:  4093 Name:  ? AT1G50700
Secondary Identifier:  ? PAC:19654266
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50700 0.5kb upstream 0.5kb upstream 3169 true Chr1: 18781414-18784582 Arabidopsis thaliana
AT1G50700 0.5kb upstream 0.5kb upstream 500 false Chr1: 18781414-18781913 Arabidopsis thaliana
AT1G50700 0.5kb downstream 0.5kb downstream 3169 true Chr1: 18781914-18785082 Arabidopsis thaliana
AT1G50700 0.5kb downstream 0.5kb downstream 500 false Chr1: 18784583-18785082 Arabidopsis thaliana
AT1G50700 1.0kb upstream 1.0kb upstream 3669 true Chr1: 18780914-18784582 Arabidopsis thaliana
AT1G50700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18780914-18781913 Arabidopsis thaliana
AT1G50700 1.0kb downstream 1.0kb downstream 3669 true Chr1: 18781914-18785582 Arabidopsis thaliana
AT1G50700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18784583-18785582 Arabidopsis thaliana
AT1G50700 2.0kb upstream 2.0kb upstream 4669 true Chr1: 18779914-18784582 Arabidopsis thaliana
AT1G50700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18779914-18781913 Arabidopsis thaliana
AT1G50700 2.0kb downstream 2.0kb downstream 4669 true Chr1: 18781914-18786582 Arabidopsis thaliana
AT1G50700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18784583-18786582 Arabidopsis thaliana
AT1G50700 5.0kb upstream 5.0kb upstream 7669 true Chr1: 18776914-18784582 Arabidopsis thaliana
AT1G50700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18776914-18781913 Arabidopsis thaliana
AT1G50700 5.0kb downstream 5.0kb downstream 7669 true Chr1: 18781914-18789582 Arabidopsis thaliana
AT1G50700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18784583-18789582 Arabidopsis thaliana
AT1G50700 10.0kb upstream 10.0kb upstream 12669 true Chr1: 18771914-18784582 Arabidopsis thaliana
AT1G50700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18771914-18781913 Arabidopsis thaliana
AT1G50700 10.0kb downstream 10.0kb downstream 12669 true Chr1: 18781914-18794582 Arabidopsis thaliana
AT1G50700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18784583-18794582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343131 5261 Brassicaceae View MSA
123783421 5264 Brassicales-Malvales View MSA
124281656 5266 SBM View MSA
124136378 5268 Malvidae View MSA
123864248 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.41        
cufflinks 6.601        
cufflinks 3.071       Low
cufflinks 6.364        
cufflinks 2.968       Low
cufflinks 6.022        

0 Strain