Gene : NTMC2T5.1 A. thaliana TAIR10
Primary Identifier:  ? AT1G50260 Defline:  (1 of 2) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  4048 Name:  ? AT1G50260
Secondary Identifier:  ? PAC:19651336
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50260 0.5kb upstream 0.5kb upstream 4647 true Chr1: 18617593-18622239 Arabidopsis thaliana
AT1G50260 0.5kb upstream 0.5kb upstream 500 false Chr1: 18621740-18622239 Arabidopsis thaliana
AT1G50260 0.5kb downstream 0.5kb downstream 4647 true Chr1: 18617093-18621739 Arabidopsis thaliana
AT1G50260 0.5kb downstream 0.5kb downstream 500 false Chr1: 18617093-18617592 Arabidopsis thaliana
AT1G50260 1.0kb upstream 1.0kb upstream 5147 true Chr1: 18617593-18622739 Arabidopsis thaliana
AT1G50260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18621740-18622739 Arabidopsis thaliana
AT1G50260 1.0kb downstream 1.0kb downstream 5147 true Chr1: 18616593-18621739 Arabidopsis thaliana
AT1G50260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18616593-18617592 Arabidopsis thaliana
AT1G50260 2.0kb upstream 2.0kb upstream 6147 true Chr1: 18617593-18623739 Arabidopsis thaliana
AT1G50260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18621740-18623739 Arabidopsis thaliana
AT1G50260 2.0kb downstream 2.0kb downstream 6147 true Chr1: 18615593-18621739 Arabidopsis thaliana
AT1G50260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18615593-18617592 Arabidopsis thaliana
AT1G50260 5.0kb upstream 5.0kb upstream 9147 true Chr1: 18617593-18626739 Arabidopsis thaliana
AT1G50260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18621740-18626739 Arabidopsis thaliana
AT1G50260 5.0kb downstream 5.0kb downstream 9147 true Chr1: 18612593-18621739 Arabidopsis thaliana
AT1G50260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18612593-18617592 Arabidopsis thaliana
AT1G50260 10.0kb upstream 10.0kb upstream 14147 true Chr1: 18617593-18631739 Arabidopsis thaliana
AT1G50260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18621740-18631739 Arabidopsis thaliana
AT1G50260 10.0kb downstream 10.0kb downstream 14147 true Chr1: 18607593-18621739 Arabidopsis thaliana
AT1G50260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18607593-18617592 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343132 5261 Brassicaceae View MSA
123783422 5264 Brassicales-Malvales View MSA
124281657 5266 SBM View MSA
124244060 5268 Malvidae View MSA
124061205 5270 Rosid View MSA
123738093 5271 Pentapetalae View MSA
122787602 5272 Eudicot View MSA
122047989 5273 Angiosperm View MSA
121348043 5274 Embryophyte View MSA
123426987 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.891        
cufflinks 1.815        
cufflinks 2.402        
cufflinks 2.273        
cufflinks 2.597       High
cufflinks 1.312       Low

0 Strain