Gene : VIIIA A. thaliana TAIR10
Primary Identifier:  ? AT1G50360 Defline:  (1 of 4) PTHR13140:SF384 - MYOSIN-2
Genomic Order:  4058 Name:  ? AT1G50360
Secondary Identifier:  ? PAC:19657716
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50360 0.5kb upstream 0.5kb upstream 8130 true Chr1: 18649247-18657376 Arabidopsis thaliana
AT1G50360 0.5kb upstream 0.5kb upstream 500 false Chr1: 18649247-18649746 Arabidopsis thaliana
AT1G50360 0.5kb downstream 0.5kb downstream 8130 true Chr1: 18649747-18657876 Arabidopsis thaliana
AT1G50360 0.5kb downstream 0.5kb downstream 500 false Chr1: 18657377-18657876 Arabidopsis thaliana
AT1G50360 1.0kb upstream 1.0kb upstream 8630 true Chr1: 18648747-18657376 Arabidopsis thaliana
AT1G50360 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18648747-18649746 Arabidopsis thaliana
AT1G50360 1.0kb downstream 1.0kb downstream 8630 true Chr1: 18649747-18658376 Arabidopsis thaliana
AT1G50360 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18657377-18658376 Arabidopsis thaliana
AT1G50360 2.0kb upstream 2.0kb upstream 9630 true Chr1: 18647747-18657376 Arabidopsis thaliana
AT1G50360 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18647747-18649746 Arabidopsis thaliana
AT1G50360 2.0kb downstream 2.0kb downstream 9630 true Chr1: 18649747-18659376 Arabidopsis thaliana
AT1G50360 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18657377-18659376 Arabidopsis thaliana
AT1G50360 5.0kb upstream 5.0kb upstream 12630 true Chr1: 18644747-18657376 Arabidopsis thaliana
AT1G50360 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18644747-18649746 Arabidopsis thaliana
AT1G50360 5.0kb downstream 5.0kb downstream 12630 true Chr1: 18649747-18662376 Arabidopsis thaliana
AT1G50360 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18657377-18662376 Arabidopsis thaliana
AT1G50360 10.0kb upstream 10.0kb upstream 17630 true Chr1: 18639747-18657376 Arabidopsis thaliana
AT1G50360 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18639747-18649746 Arabidopsis thaliana
AT1G50360 10.0kb downstream 10.0kb downstream 17630 true Chr1: 18649747-18667376 Arabidopsis thaliana
AT1G50360 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18657377-18667376 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361492 5261 Brassicaceae View MSA
123838995 5264 Brassicales-Malvales View MSA
124343624 5266 SBM View MSA
124241967 5268 Malvidae View MSA
124066998 5270 Rosid View MSA
123737228 5271 Pentapetalae View MSA
122787134 5272 Eudicot View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.575       High
cufflinks 6.228        
cufflinks 5.067       Low
cufflinks 6.374        
cufflinks 5.428        
cufflinks 5.96        

0 Strain