Gene : AT1G50400 A. thaliana TAIR10
Defline:  (1 of 2) K11518 - mitochondrial import receptor subunit TOM40 (TOM40) Genomic Order:  4062
Name:  ? AT1G50400 Secondary Identifier:  ? PAC:19650516
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50400 0.5kb upstream 0.5kb upstream 2892 true Chr1: 18667655-18670546 Arabidopsis thaliana
AT1G50400 0.5kb upstream 0.5kb upstream 500 false Chr1: 18667655-18668154 Arabidopsis thaliana
AT1G50400 0.5kb downstream 0.5kb downstream 2892 true Chr1: 18668155-18671046 Arabidopsis thaliana
AT1G50400 0.5kb downstream 0.5kb downstream 500 false Chr1: 18670547-18671046 Arabidopsis thaliana
AT1G50400 1.0kb upstream 1.0kb upstream 3392 true Chr1: 18667155-18670546 Arabidopsis thaliana
AT1G50400 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18667155-18668154 Arabidopsis thaliana
AT1G50400 1.0kb downstream 1.0kb downstream 3392 true Chr1: 18668155-18671546 Arabidopsis thaliana
AT1G50400 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18670547-18671546 Arabidopsis thaliana
AT1G50400 2.0kb upstream 2.0kb upstream 4392 true Chr1: 18666155-18670546 Arabidopsis thaliana
AT1G50400 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18666155-18668154 Arabidopsis thaliana
AT1G50400 2.0kb downstream 2.0kb downstream 4392 true Chr1: 18668155-18672546 Arabidopsis thaliana
AT1G50400 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18670547-18672546 Arabidopsis thaliana
AT1G50400 5.0kb upstream 5.0kb upstream 7392 true Chr1: 18663155-18670546 Arabidopsis thaliana
AT1G50400 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18663155-18668154 Arabidopsis thaliana
AT1G50400 5.0kb downstream 5.0kb downstream 7392 true Chr1: 18668155-18675546 Arabidopsis thaliana
AT1G50400 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18670547-18675546 Arabidopsis thaliana
AT1G50400 10.0kb upstream 10.0kb upstream 12392 true Chr1: 18658155-18670546 Arabidopsis thaliana
AT1G50400 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18658155-18668154 Arabidopsis thaliana
AT1G50400 10.0kb downstream 10.0kb downstream 12392 true Chr1: 18668155-18680546 Arabidopsis thaliana
AT1G50400 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18670547-18680546 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380040 5261 Brassicaceae View MSA
123838241 5264 Brassicales-Malvales View MSA
124340924 5266 SBM View MSA
124240553 5268 Malvidae View MSA
124062274 5270 Rosid View MSA
123746646 5271 Pentapetalae View MSA
122793036 5272 Eudicot View MSA
122044875 5273 Angiosperm View MSA
121346968 5274 Embryophyte View MSA
123428868 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.317       High
cufflinks 0.145     Low  
cufflinks 0.119     Low Low
cufflinks 0.234     Low  
cufflinks 0.154     Low  
cufflinks 0.187     Low  

0 Strain