Gene : SIRB A. thaliana TAIR10
Primary Identifier:  ? AT1G50170 Defline:  (1 of 1) PF01903 - CbiX (CbiX)
Genomic Order:  4041 Name:  ? AT1G50170
Secondary Identifier:  ? PAC:19657517
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50170 0.5kb upstream 0.5kb upstream 2201 true Chr1: 18581524-18583724 Arabidopsis thaliana
AT1G50170 0.5kb upstream 0.5kb upstream 500 false Chr1: 18581524-18582023 Arabidopsis thaliana
AT1G50170 0.5kb downstream 0.5kb downstream 2201 true Chr1: 18582024-18584224 Arabidopsis thaliana
AT1G50170 0.5kb downstream 0.5kb downstream 500 false Chr1: 18583725-18584224 Arabidopsis thaliana
AT1G50170 1.0kb upstream 1.0kb upstream 2701 true Chr1: 18581024-18583724 Arabidopsis thaliana
AT1G50170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18581024-18582023 Arabidopsis thaliana
AT1G50170 1.0kb downstream 1.0kb downstream 2701 true Chr1: 18582024-18584724 Arabidopsis thaliana
AT1G50170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18583725-18584724 Arabidopsis thaliana
AT1G50170 2.0kb upstream 2.0kb upstream 3701 true Chr1: 18580024-18583724 Arabidopsis thaliana
AT1G50170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18580024-18582023 Arabidopsis thaliana
AT1G50170 2.0kb downstream 2.0kb downstream 3701 true Chr1: 18582024-18585724 Arabidopsis thaliana
AT1G50170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18583725-18585724 Arabidopsis thaliana
AT1G50170 5.0kb upstream 5.0kb upstream 6701 true Chr1: 18577024-18583724 Arabidopsis thaliana
AT1G50170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18577024-18582023 Arabidopsis thaliana
AT1G50170 5.0kb downstream 5.0kb downstream 6701 true Chr1: 18582024-18588724 Arabidopsis thaliana
AT1G50170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18583725-18588724 Arabidopsis thaliana
AT1G50170 10.0kb upstream 10.0kb upstream 11701 true Chr1: 18572024-18583724 Arabidopsis thaliana
AT1G50170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18572024-18582023 Arabidopsis thaliana
AT1G50170 10.0kb downstream 10.0kb downstream 11701 true Chr1: 18582024-18593724 Arabidopsis thaliana
AT1G50170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18583725-18593724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371134 5261 Brassicaceae View MSA
123831855 5264 Brassicales-Malvales View MSA
124338343 5266 SBM View MSA
124252135 5268 Malvidae View MSA
124063456 5270 Rosid View MSA
123740171 5271 Pentapetalae View MSA
122786362 5272 Eudicot View MSA
122045035 5273 Angiosperm View MSA
123429085 5275 Viridiplantae View MSA
121345906 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.473        
cufflinks 6.993        
cufflinks 15.073        
cufflinks 6.915        
cufflinks 14.696        
cufflinks 6.093       Low

0 Strain