Gene : AT1G49800 A. thaliana TAIR10
Genomic Order:  4006 Name:  ? AT1G49800
Secondary Identifier:  ? PAC:19658079
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49800 0.5kb upstream 0.5kb upstream 1075 true Chr1: 18438365-18439439 Arabidopsis thaliana
AT1G49800 0.5kb upstream 0.5kb upstream 500 false Chr1: 18438940-18439439 Arabidopsis thaliana
AT1G49800 0.5kb downstream 0.5kb downstream 1075 true Chr1: 18437865-18438939 Arabidopsis thaliana
AT1G49800 0.5kb downstream 0.5kb downstream 500 false Chr1: 18437865-18438364 Arabidopsis thaliana
AT1G49800 1.0kb upstream 1.0kb upstream 1575 true Chr1: 18438365-18439939 Arabidopsis thaliana
AT1G49800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18438940-18439939 Arabidopsis thaliana
AT1G49800 1.0kb downstream 1.0kb downstream 1575 true Chr1: 18437365-18438939 Arabidopsis thaliana
AT1G49800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18437365-18438364 Arabidopsis thaliana
AT1G49800 2.0kb upstream 2.0kb upstream 2575 true Chr1: 18438365-18440939 Arabidopsis thaliana
AT1G49800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18438940-18440939 Arabidopsis thaliana
AT1G49800 2.0kb downstream 2.0kb downstream 2575 true Chr1: 18436365-18438939 Arabidopsis thaliana
AT1G49800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18436365-18438364 Arabidopsis thaliana
AT1G49800 5.0kb upstream 5.0kb upstream 5575 true Chr1: 18438365-18443939 Arabidopsis thaliana
AT1G49800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18438940-18443939 Arabidopsis thaliana
AT1G49800 5.0kb downstream 5.0kb downstream 5575 true Chr1: 18433365-18438939 Arabidopsis thaliana
AT1G49800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18433365-18438364 Arabidopsis thaliana
AT1G49800 10.0kb upstream 10.0kb upstream 10575 true Chr1: 18438365-18448939 Arabidopsis thaliana
AT1G49800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18438940-18448939 Arabidopsis thaliana
AT1G49800 10.0kb downstream 10.0kb downstream 10575 true Chr1: 18428365-18438939 Arabidopsis thaliana
AT1G49800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18428365-18438364 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792041 5273 Angiosperm View MSA
122369120 5261 Brassicaceae View MSA
123799722 5264 Brassicales-Malvales View MSA
124297214 5266 SBM View MSA
124253003 5268 Malvidae View MSA
124071896 5270 Rosid View MSA
123753077 5271 Pentapetalae View MSA
122796061 5272 Eudicot View MSA
121063299 5274 Embryophyte View MSA
123103061 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low Low
cufflinks 0.054     Low  
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain