Gene : AT1G50910 A. thaliana TAIR10
Defline:  (1 of 1) PF14780 - Domain of unknown function (DUF4477) (DUF4477) Genomic Order:  4112
Name:  ? AT1G50910 Secondary Identifier:  ? PAC:19656065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50910 0.5kb upstream 0.5kb upstream 3681 true Chr1: 18866753-18870433 Arabidopsis thaliana
AT1G50910 0.5kb upstream 0.5kb upstream 500 false Chr1: 18869934-18870433 Arabidopsis thaliana
AT1G50910 0.5kb downstream 0.5kb downstream 3681 true Chr1: 18866253-18869933 Arabidopsis thaliana
AT1G50910 0.5kb downstream 0.5kb downstream 500 false Chr1: 18866253-18866752 Arabidopsis thaliana
AT1G50910 1.0kb upstream 1.0kb upstream 4181 true Chr1: 18866753-18870933 Arabidopsis thaliana
AT1G50910 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18869934-18870933 Arabidopsis thaliana
AT1G50910 1.0kb downstream 1.0kb downstream 4181 true Chr1: 18865753-18869933 Arabidopsis thaliana
AT1G50910 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18865753-18866752 Arabidopsis thaliana
AT1G50910 2.0kb upstream 2.0kb upstream 5181 true Chr1: 18866753-18871933 Arabidopsis thaliana
AT1G50910 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18869934-18871933 Arabidopsis thaliana
AT1G50910 2.0kb downstream 2.0kb downstream 5181 true Chr1: 18864753-18869933 Arabidopsis thaliana
AT1G50910 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18864753-18866752 Arabidopsis thaliana
AT1G50910 5.0kb upstream 5.0kb upstream 8181 true Chr1: 18866753-18874933 Arabidopsis thaliana
AT1G50910 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18869934-18874933 Arabidopsis thaliana
AT1G50910 5.0kb downstream 5.0kb downstream 8181 true Chr1: 18861753-18869933 Arabidopsis thaliana
AT1G50910 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18861753-18866752 Arabidopsis thaliana
AT1G50910 10.0kb upstream 10.0kb upstream 13181 true Chr1: 18866753-18879933 Arabidopsis thaliana
AT1G50910 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18869934-18879933 Arabidopsis thaliana
AT1G50910 10.0kb downstream 10.0kb downstream 13181 true Chr1: 18856753-18869933 Arabidopsis thaliana
AT1G50910 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18856753-18866752 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363679 5261 Brassicaceae View MSA
123798591 5264 Brassicales-Malvales View MSA
124350271 5266 SBM View MSA
124242037 5268 Malvidae View MSA
124069189 5270 Rosid View MSA
123741909 5271 Pentapetalae View MSA
122794147 5272 Eudicot View MSA
122045884 5273 Angiosperm View MSA
121347885 5274 Embryophyte View MSA
123380665 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.487        
cufflinks 2.666        
cufflinks 1.141       Low
cufflinks 2.728        
cufflinks 1.166       Low
cufflinks 2.762        

0 Strain