Gene : PREP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G49630 Defline:  (1 of 2) K06972 - uncharacterized protein (K06972)
Genomic Order:  3989 Name:  ? AT1G49630
Secondary Identifier:  ? PAC:19652016
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49630 0.5kb upstream 0.5kb upstream 8289 true Chr1: 18367593-18375881 Arabidopsis thaliana
AT1G49630 0.5kb upstream 0.5kb upstream 500 false Chr1: 18375382-18375881 Arabidopsis thaliana
AT1G49630 0.5kb downstream 0.5kb downstream 8289 true Chr1: 18367093-18375381 Arabidopsis thaliana
AT1G49630 0.5kb downstream 0.5kb downstream 500 false Chr1: 18367093-18367592 Arabidopsis thaliana
AT1G49630 1.0kb upstream 1.0kb upstream 8789 true Chr1: 18367593-18376381 Arabidopsis thaliana
AT1G49630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18375382-18376381 Arabidopsis thaliana
AT1G49630 1.0kb downstream 1.0kb downstream 8789 true Chr1: 18366593-18375381 Arabidopsis thaliana
AT1G49630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18366593-18367592 Arabidopsis thaliana
AT1G49630 2.0kb upstream 2.0kb upstream 9789 true Chr1: 18367593-18377381 Arabidopsis thaliana
AT1G49630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18375382-18377381 Arabidopsis thaliana
AT1G49630 2.0kb downstream 2.0kb downstream 9789 true Chr1: 18365593-18375381 Arabidopsis thaliana
AT1G49630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18365593-18367592 Arabidopsis thaliana
AT1G49630 5.0kb upstream 5.0kb upstream 12789 true Chr1: 18367593-18380381 Arabidopsis thaliana
AT1G49630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18375382-18380381 Arabidopsis thaliana
AT1G49630 5.0kb downstream 5.0kb downstream 12789 true Chr1: 18362593-18375381 Arabidopsis thaliana
AT1G49630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18362593-18367592 Arabidopsis thaliana
AT1G49630 10.0kb upstream 10.0kb upstream 17789 true Chr1: 18367593-18385381 Arabidopsis thaliana
AT1G49630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18375382-18385381 Arabidopsis thaliana
AT1G49630 10.0kb downstream 10.0kb downstream 17789 true Chr1: 18357593-18375381 Arabidopsis thaliana
AT1G49630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18357593-18367592 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375011 5261 Brassicaceae View MSA
123836857 5264 Brassicales-Malvales View MSA
124338664 5266 SBM View MSA
124243090 5268 Malvidae View MSA
124061044 5270 Rosid View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.579       High
cufflinks 0.736        
cufflinks 1.423        
cufflinks 0.803        
cufflinks 1.323        
cufflinks 0.714       Low

0 Strain