Gene : AT1G49650 A. thaliana TAIR10
Defline:  (1 of 4) PTHR23024//PTHR23024:SF131 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 2-RELATED Genomic Order:  3991
Name:  ? AT1G49650 Secondary Identifier:  ? PAC:19651755
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6303 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49650 0.5kb upstream 0.5kb upstream 1883 true Chr1: 18377252-18379134 Arabidopsis thaliana
AT1G49650 0.5kb upstream 0.5kb upstream 500 false Chr1: 18378635-18379134 Arabidopsis thaliana
AT1G49650 0.5kb downstream 0.5kb downstream 1883 true Chr1: 18376752-18378634 Arabidopsis thaliana
AT1G49650 0.5kb downstream 0.5kb downstream 500 false Chr1: 18376752-18377251 Arabidopsis thaliana
AT1G49650 1.0kb upstream 1.0kb upstream 2383 true Chr1: 18377252-18379634 Arabidopsis thaliana
AT1G49650 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18378635-18379634 Arabidopsis thaliana
AT1G49650 1.0kb downstream 1.0kb downstream 2383 true Chr1: 18376252-18378634 Arabidopsis thaliana
AT1G49650 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18376252-18377251 Arabidopsis thaliana
AT1G49650 2.0kb upstream 2.0kb upstream 3383 true Chr1: 18377252-18380634 Arabidopsis thaliana
AT1G49650 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18378635-18380634 Arabidopsis thaliana
AT1G49650 2.0kb downstream 2.0kb downstream 3383 true Chr1: 18375252-18378634 Arabidopsis thaliana
AT1G49650 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18375252-18377251 Arabidopsis thaliana
AT1G49650 5.0kb upstream 5.0kb upstream 6383 true Chr1: 18377252-18383634 Arabidopsis thaliana
AT1G49650 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18378635-18383634 Arabidopsis thaliana
AT1G49650 5.0kb downstream 5.0kb downstream 6383 true Chr1: 18372252-18378634 Arabidopsis thaliana
AT1G49650 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18372252-18377251 Arabidopsis thaliana
AT1G49650 10.0kb upstream 10.0kb upstream 11383 true Chr1: 18377252-18388634 Arabidopsis thaliana
AT1G49650 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18378635-18388634 Arabidopsis thaliana
AT1G49650 10.0kb downstream 10.0kb downstream 11383 true Chr1: 18367252-18378634 Arabidopsis thaliana
AT1G49650 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18367252-18377251 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369611 5261 Brassicaceae View MSA
123799810 5264 Brassicales-Malvales View MSA
124297294 5266 SBM View MSA
124252668 5268 Malvidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.413        
cufflinks 6.899        
cufflinks 15.895       High
cufflinks 6.332        
cufflinks 12.668        
cufflinks 5.091       Low

0 Strain