Gene : AT1G60190 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23315//PTHR23315:SF116 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  4917
Name:  ? AT1G60190 Secondary Identifier:  ? PAC:19649572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60190 0.5kb upstream 0.5kb upstream 2776 true Chr1: 22197903-22200678 Arabidopsis thaliana
AT1G60190 0.5kb upstream 0.5kb upstream 500 false Chr1: 22197903-22198402 Arabidopsis thaliana
AT1G60190 0.5kb downstream 0.5kb downstream 2776 true Chr1: 22198403-22201178 Arabidopsis thaliana
AT1G60190 0.5kb downstream 0.5kb downstream 500 false Chr1: 22200679-22201178 Arabidopsis thaliana
AT1G60190 1.0kb upstream 1.0kb upstream 3276 true Chr1: 22197403-22200678 Arabidopsis thaliana
AT1G60190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22197403-22198402 Arabidopsis thaliana
AT1G60190 1.0kb downstream 1.0kb downstream 3276 true Chr1: 22198403-22201678 Arabidopsis thaliana
AT1G60190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22200679-22201678 Arabidopsis thaliana
AT1G60190 2.0kb upstream 2.0kb upstream 4276 true Chr1: 22196403-22200678 Arabidopsis thaliana
AT1G60190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22196403-22198402 Arabidopsis thaliana
AT1G60190 2.0kb downstream 2.0kb downstream 4276 true Chr1: 22198403-22202678 Arabidopsis thaliana
AT1G60190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22200679-22202678 Arabidopsis thaliana
AT1G60190 5.0kb upstream 5.0kb upstream 7276 true Chr1: 22193403-22200678 Arabidopsis thaliana
AT1G60190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22193403-22198402 Arabidopsis thaliana
AT1G60190 5.0kb downstream 5.0kb downstream 7276 true Chr1: 22198403-22205678 Arabidopsis thaliana
AT1G60190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22200679-22205678 Arabidopsis thaliana
AT1G60190 10.0kb upstream 10.0kb upstream 12276 true Chr1: 22188403-22200678 Arabidopsis thaliana
AT1G60190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22188403-22198402 Arabidopsis thaliana
AT1G60190 10.0kb downstream 10.0kb downstream 12276 true Chr1: 22198403-22210678 Arabidopsis thaliana
AT1G60190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22200679-22210678 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367621 5261 Brassicaceae View MSA
123836521 5264 Brassicales-Malvales View MSA
124341451 5266 SBM View MSA
124245770 5268 Malvidae View MSA
124069612 5270 Rosid View MSA
123741587 5271 Pentapetalae View MSA
122786622 5272 Eudicot View MSA
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.975       Low
cufflinks 14.964        
cufflinks 6.518        
cufflinks 21.254        
cufflinks 2.839        
cufflinks 13.976        

0 Strain