Gene : emb1220 A. thaliana TAIR10
Primary Identifier:  ? AT1G60170 Defline:  (1 of 1) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31)
Genomic Order:  4916 Name:  ? AT1G60170
Secondary Identifier:  ? PAC:19655117
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60170 0.5kb upstream 0.5kb upstream 3128 true Chr1: 22192273-22195400 Arabidopsis thaliana
AT1G60170 0.5kb upstream 0.5kb upstream 500 false Chr1: 22192273-22192772 Arabidopsis thaliana
AT1G60170 0.5kb downstream 0.5kb downstream 3128 true Chr1: 22192773-22195900 Arabidopsis thaliana
AT1G60170 0.5kb downstream 0.5kb downstream 500 false Chr1: 22195401-22195900 Arabidopsis thaliana
AT1G60170 1.0kb upstream 1.0kb upstream 3628 true Chr1: 22191773-22195400 Arabidopsis thaliana
AT1G60170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22191773-22192772 Arabidopsis thaliana
AT1G60170 1.0kb downstream 1.0kb downstream 3628 true Chr1: 22192773-22196400 Arabidopsis thaliana
AT1G60170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22195401-22196400 Arabidopsis thaliana
AT1G60170 2.0kb upstream 2.0kb upstream 4628 true Chr1: 22190773-22195400 Arabidopsis thaliana
AT1G60170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22190773-22192772 Arabidopsis thaliana
AT1G60170 2.0kb downstream 2.0kb downstream 4628 true Chr1: 22192773-22197400 Arabidopsis thaliana
AT1G60170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22195401-22197400 Arabidopsis thaliana
AT1G60170 5.0kb upstream 5.0kb upstream 7628 true Chr1: 22187773-22195400 Arabidopsis thaliana
AT1G60170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22187773-22192772 Arabidopsis thaliana
AT1G60170 5.0kb downstream 5.0kb downstream 7628 true Chr1: 22192773-22200400 Arabidopsis thaliana
AT1G60170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22195401-22200400 Arabidopsis thaliana
AT1G60170 10.0kb upstream 10.0kb upstream 12628 true Chr1: 22182773-22195400 Arabidopsis thaliana
AT1G60170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22182773-22192772 Arabidopsis thaliana
AT1G60170 10.0kb downstream 10.0kb downstream 12628 true Chr1: 22192773-22205400 Arabidopsis thaliana
AT1G60170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22195401-22205400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372123 5261 Brassicaceae View MSA
123828059 5264 Brassicales-Malvales View MSA
124344698 5266 SBM View MSA
124244824 5268 Malvidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.855       Low
cufflinks 23.108        
cufflinks 19.068        
cufflinks 23.946       High
cufflinks 19.483        
cufflinks 20.744        

0 Strain