Gene : AT1G59970 A. thaliana TAIR10
Defline:  (1 of 1) K07761 - gelatinase A (E3.4.24.24) Genomic Order:  4899
Name:  ? AT1G59970 Secondary Identifier:  ? PAC:19649489
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G59970 0.5kb upstream 0.5kb upstream 1843 true Chr1: 22073034-22074876 Arabidopsis thaliana
AT1G59970 0.5kb upstream 0.5kb upstream 500 false Chr1: 22073034-22073533 Arabidopsis thaliana
AT1G59970 0.5kb downstream 0.5kb downstream 1843 true Chr1: 22073534-22075376 Arabidopsis thaliana
AT1G59970 0.5kb downstream 0.5kb downstream 500 false Chr1: 22074877-22075376 Arabidopsis thaliana
AT1G59970 1.0kb upstream 1.0kb upstream 2343 true Chr1: 22072534-22074876 Arabidopsis thaliana
AT1G59970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22072534-22073533 Arabidopsis thaliana
AT1G59970 1.0kb downstream 1.0kb downstream 2343 true Chr1: 22073534-22075876 Arabidopsis thaliana
AT1G59970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22074877-22075876 Arabidopsis thaliana
AT1G59970 2.0kb upstream 2.0kb upstream 3343 true Chr1: 22071534-22074876 Arabidopsis thaliana
AT1G59970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22071534-22073533 Arabidopsis thaliana
AT1G59970 2.0kb downstream 2.0kb downstream 3343 true Chr1: 22073534-22076876 Arabidopsis thaliana
AT1G59970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22074877-22076876 Arabidopsis thaliana
AT1G59970 5.0kb upstream 5.0kb upstream 6343 true Chr1: 22068534-22074876 Arabidopsis thaliana
AT1G59970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22068534-22073533 Arabidopsis thaliana
AT1G59970 5.0kb downstream 5.0kb downstream 6343 true Chr1: 22073534-22079876 Arabidopsis thaliana
AT1G59970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22074877-22079876 Arabidopsis thaliana
AT1G59970 10.0kb upstream 10.0kb upstream 11343 true Chr1: 22063534-22074876 Arabidopsis thaliana
AT1G59970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22063534-22073533 Arabidopsis thaliana
AT1G59970 10.0kb downstream 10.0kb downstream 11343 true Chr1: 22073534-22084876 Arabidopsis thaliana
AT1G59970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22074877-22084876 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
122370435 5261 Brassicaceae View MSA
123799962 5264 Brassicales-Malvales View MSA
124297429 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.259        
cufflinks 15.009        
cufflinks 4.1       Low
cufflinks 16.443        
cufflinks 4.139       Low
cufflinks 15.259        

0 Strain