Gene : CW9 A. thaliana TAIR10
Primary Identifier:  ? AT1G59620 Defline:  (1 of 16) PTHR23155//PTHR23155:SF549 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED
Genomic Order:  4859 Name:  ? AT1G59620
Secondary Identifier:  ? PAC:19651608
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G59620 0.5kb upstream 0.5kb upstream 3902 true Chr1: 21901784-21905685 Arabidopsis thaliana
AT1G59620 0.5kb upstream 0.5kb upstream 500 false Chr1: 21901784-21902283 Arabidopsis thaliana
AT1G59620 0.5kb downstream 0.5kb downstream 3902 true Chr1: 21902284-21906185 Arabidopsis thaliana
AT1G59620 0.5kb downstream 0.5kb downstream 500 false Chr1: 21905686-21906185 Arabidopsis thaliana
AT1G59620 1.0kb upstream 1.0kb upstream 4402 true Chr1: 21901284-21905685 Arabidopsis thaliana
AT1G59620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21901284-21902283 Arabidopsis thaliana
AT1G59620 1.0kb downstream 1.0kb downstream 4402 true Chr1: 21902284-21906685 Arabidopsis thaliana
AT1G59620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21905686-21906685 Arabidopsis thaliana
AT1G59620 2.0kb upstream 2.0kb upstream 5402 true Chr1: 21900284-21905685 Arabidopsis thaliana
AT1G59620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21900284-21902283 Arabidopsis thaliana
AT1G59620 2.0kb downstream 2.0kb downstream 5402 true Chr1: 21902284-21907685 Arabidopsis thaliana
AT1G59620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21905686-21907685 Arabidopsis thaliana
AT1G59620 5.0kb upstream 5.0kb upstream 8402 true Chr1: 21897284-21905685 Arabidopsis thaliana
AT1G59620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21897284-21902283 Arabidopsis thaliana
AT1G59620 5.0kb downstream 5.0kb downstream 8402 true Chr1: 21902284-21910685 Arabidopsis thaliana
AT1G59620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21905686-21910685 Arabidopsis thaliana
AT1G59620 10.0kb upstream 10.0kb upstream 13402 true Chr1: 21892284-21905685 Arabidopsis thaliana
AT1G59620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21892284-21902283 Arabidopsis thaliana
AT1G59620 10.0kb downstream 10.0kb downstream 13402 true Chr1: 21902284-21915685 Arabidopsis thaliana
AT1G59620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21905686-21915685 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381597 5261 Brassicaceae View MSA
123841874 5264 Brassicales-Malvales View MSA
124350995 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.38       High
cufflinks 7.535        
cufflinks 12.323        
cufflinks 5.995       Low
cufflinks 10.968        
cufflinks 6.944        

0 Strain