Gene : AT1G58410 A. thaliana TAIR10
Defline:  (1 of 16) PTHR23155//PTHR23155:SF549 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED Genomic Order:  4821
Name:  ? AT1G58410 Secondary Identifier:  ? PAC:19655379
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58410 0.5kb upstream 0.5kb upstream 3571 true Chr1: 21701185-21704755 Arabidopsis thaliana
AT1G58410 0.5kb upstream 0.5kb upstream 500 false Chr1: 21704256-21704755 Arabidopsis thaliana
AT1G58410 0.5kb downstream 0.5kb downstream 3571 true Chr1: 21700685-21704255 Arabidopsis thaliana
AT1G58410 0.5kb downstream 0.5kb downstream 500 false Chr1: 21700685-21701184 Arabidopsis thaliana
AT1G58410 1.0kb upstream 1.0kb upstream 4071 true Chr1: 21701185-21705255 Arabidopsis thaliana
AT1G58410 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21704256-21705255 Arabidopsis thaliana
AT1G58410 1.0kb downstream 1.0kb downstream 4071 true Chr1: 21700185-21704255 Arabidopsis thaliana
AT1G58410 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21700185-21701184 Arabidopsis thaliana
AT1G58410 2.0kb upstream 2.0kb upstream 5071 true Chr1: 21701185-21706255 Arabidopsis thaliana
AT1G58410 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21704256-21706255 Arabidopsis thaliana
AT1G58410 2.0kb downstream 2.0kb downstream 5071 true Chr1: 21699185-21704255 Arabidopsis thaliana
AT1G58410 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21699185-21701184 Arabidopsis thaliana
AT1G58410 5.0kb upstream 5.0kb upstream 8071 true Chr1: 21701185-21709255 Arabidopsis thaliana
AT1G58410 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21704256-21709255 Arabidopsis thaliana
AT1G58410 5.0kb downstream 5.0kb downstream 8071 true Chr1: 21696185-21704255 Arabidopsis thaliana
AT1G58410 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21696185-21701184 Arabidopsis thaliana
AT1G58410 10.0kb upstream 10.0kb upstream 13071 true Chr1: 21701185-21714255 Arabidopsis thaliana
AT1G58410 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21704256-21714255 Arabidopsis thaliana
AT1G58410 10.0kb downstream 10.0kb downstream 13071 true Chr1: 21691185-21704255 Arabidopsis thaliana
AT1G58410 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21691185-21701184 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381597 5261 Brassicaceae View MSA
123841874 5264 Brassicales-Malvales View MSA
124350995 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.365        
cufflinks 4.59        
cufflinks 0.283        
cufflinks 4.787        
cufflinks 0.229     Low Low
cufflinks 3.75        

0 Strain