Gene : AT1G58230 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13743//PTHR13743:SF83 - BEIGE/BEACH-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4799
Name:  ? AT1G58230 Secondary Identifier:  ? PAC:19656464
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58230 0.5kb upstream 0.5kb upstream 13476 true Chr1: 21565648-21579123 Arabidopsis thaliana
AT1G58230 0.5kb upstream 0.5kb upstream 500 false Chr1: 21565648-21566147 Arabidopsis thaliana
AT1G58230 0.5kb downstream 0.5kb downstream 13476 true Chr1: 21566148-21579623 Arabidopsis thaliana
AT1G58230 0.5kb downstream 0.5kb downstream 500 false Chr1: 21579124-21579623 Arabidopsis thaliana
AT1G58230 1.0kb upstream 1.0kb upstream 13976 true Chr1: 21565148-21579123 Arabidopsis thaliana
AT1G58230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21565148-21566147 Arabidopsis thaliana
AT1G58230 1.0kb downstream 1.0kb downstream 13976 true Chr1: 21566148-21580123 Arabidopsis thaliana
AT1G58230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21579124-21580123 Arabidopsis thaliana
AT1G58230 2.0kb upstream 2.0kb upstream 14976 true Chr1: 21564148-21579123 Arabidopsis thaliana
AT1G58230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21564148-21566147 Arabidopsis thaliana
AT1G58230 2.0kb downstream 2.0kb downstream 14976 true Chr1: 21566148-21581123 Arabidopsis thaliana
AT1G58230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21579124-21581123 Arabidopsis thaliana
AT1G58230 5.0kb upstream 5.0kb upstream 17976 true Chr1: 21561148-21579123 Arabidopsis thaliana
AT1G58230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21561148-21566147 Arabidopsis thaliana
AT1G58230 5.0kb downstream 5.0kb downstream 17976 true Chr1: 21566148-21584123 Arabidopsis thaliana
AT1G58230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21579124-21584123 Arabidopsis thaliana
AT1G58230 10.0kb upstream 10.0kb upstream 22976 true Chr1: 21556148-21579123 Arabidopsis thaliana
AT1G58230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21556148-21566147 Arabidopsis thaliana
AT1G58230 10.0kb downstream 10.0kb downstream 22976 true Chr1: 21566148-21589123 Arabidopsis thaliana
AT1G58230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21579124-21589123 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371421 5261 Brassicaceae View MSA
123827487 5264 Brassicales-Malvales View MSA
124342026 5266 SBM View MSA
124239843 5268 Malvidae View MSA
124067122 5270 Rosid View MSA
123749125 5271 Pentapetalae View MSA
122793311 5272 Eudicot View MSA
122051109 5273 Angiosperm View MSA
121349597 5274 Embryophyte View MSA
123381372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.626        
cufflinks 7.19        
cufflinks 3.894       Low
cufflinks 7.378        
cufflinks 4.151       Low
cufflinks 7.882       High

0 Strain