Gene : AT1G58025 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22880//PTHR22880:SF174 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN Genomic Order:  4777
Name:  ? AT1G58025 Secondary Identifier:  ? PAC:19656901
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58025 0.5kb upstream 0.5kb upstream 5077 true Chr1: 21457667-21462743 Arabidopsis thaliana
AT1G58025 0.5kb upstream 0.5kb upstream 500 false Chr1: 21462244-21462743 Arabidopsis thaliana
AT1G58025 0.5kb downstream 0.5kb downstream 5077 true Chr1: 21457167-21462243 Arabidopsis thaliana
AT1G58025 0.5kb downstream 0.5kb downstream 500 false Chr1: 21457167-21457666 Arabidopsis thaliana
AT1G58025 1.0kb upstream 1.0kb upstream 5577 true Chr1: 21457667-21463243 Arabidopsis thaliana
AT1G58025 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21462244-21463243 Arabidopsis thaliana
AT1G58025 1.0kb downstream 1.0kb downstream 5577 true Chr1: 21456667-21462243 Arabidopsis thaliana
AT1G58025 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21456667-21457666 Arabidopsis thaliana
AT1G58025 2.0kb upstream 2.0kb upstream 6577 true Chr1: 21457667-21464243 Arabidopsis thaliana
AT1G58025 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21462244-21464243 Arabidopsis thaliana
AT1G58025 2.0kb downstream 2.0kb downstream 6577 true Chr1: 21455667-21462243 Arabidopsis thaliana
AT1G58025 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21455667-21457666 Arabidopsis thaliana
AT1G58025 5.0kb upstream 5.0kb upstream 9577 true Chr1: 21457667-21467243 Arabidopsis thaliana
AT1G58025 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21462244-21467243 Arabidopsis thaliana
AT1G58025 5.0kb downstream 5.0kb downstream 9577 true Chr1: 21452667-21462243 Arabidopsis thaliana
AT1G58025 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21452667-21457666 Arabidopsis thaliana
AT1G58025 10.0kb upstream 10.0kb upstream 14577 true Chr1: 21457667-21472243 Arabidopsis thaliana
AT1G58025 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21462244-21472243 Arabidopsis thaliana
AT1G58025 10.0kb downstream 10.0kb downstream 14577 true Chr1: 21447667-21462243 Arabidopsis thaliana
AT1G58025 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21447667-21457666 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368585 5261 Brassicaceae View MSA
123833325 5264 Brassicales-Malvales View MSA
124346045 5266 SBM View MSA
124242647 5268 Malvidae View MSA
124069417 5270 Rosid View MSA
123752980 5271 Pentapetalae View MSA
122795275 5272 Eudicot View MSA
122044114 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348064 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.127        
cufflinks 3.104        
cufflinks 1.752        
cufflinks 3.08        
cufflinks 1.482       Low
cufflinks 3.192        

0 Strain