Gene : MYB50 A. thaliana TAIR10
Primary Identifier:  ? AT1G57560 Defline:  (1 of 2) PTHR10641//PTHR10641:SF618 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 55
Genomic Order:  4740 Name:  ? AT1G57560
Secondary Identifier:  ? PAC:19652213
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G57560 0.5kb upstream 0.5kb upstream 1737 true Chr1: 21316328-21318064 Arabidopsis thaliana
AT1G57560 0.5kb upstream 0.5kb upstream 500 false Chr1: 21316328-21316827 Arabidopsis thaliana
AT1G57560 0.5kb downstream 0.5kb downstream 1737 true Chr1: 21316828-21318564 Arabidopsis thaliana
AT1G57560 0.5kb downstream 0.5kb downstream 500 false Chr1: 21318065-21318564 Arabidopsis thaliana
AT1G57560 1.0kb upstream 1.0kb upstream 2237 true Chr1: 21315828-21318064 Arabidopsis thaliana
AT1G57560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21315828-21316827 Arabidopsis thaliana
AT1G57560 1.0kb downstream 1.0kb downstream 2237 true Chr1: 21316828-21319064 Arabidopsis thaliana
AT1G57560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21318065-21319064 Arabidopsis thaliana
AT1G57560 2.0kb upstream 2.0kb upstream 3237 true Chr1: 21314828-21318064 Arabidopsis thaliana
AT1G57560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21314828-21316827 Arabidopsis thaliana
AT1G57560 2.0kb downstream 2.0kb downstream 3237 true Chr1: 21316828-21320064 Arabidopsis thaliana
AT1G57560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21318065-21320064 Arabidopsis thaliana
AT1G57560 5.0kb upstream 5.0kb upstream 6237 true Chr1: 21311828-21318064 Arabidopsis thaliana
AT1G57560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21311828-21316827 Arabidopsis thaliana
AT1G57560 5.0kb downstream 5.0kb downstream 6237 true Chr1: 21316828-21323064 Arabidopsis thaliana
AT1G57560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21318065-21323064 Arabidopsis thaliana
AT1G57560 10.0kb upstream 10.0kb upstream 11237 true Chr1: 21306828-21318064 Arabidopsis thaliana
AT1G57560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21306828-21316827 Arabidopsis thaliana
AT1G57560 10.0kb downstream 10.0kb downstream 11237 true Chr1: 21316828-21328064 Arabidopsis thaliana
AT1G57560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21318065-21328064 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376318 5261 Brassicaceae View MSA
123801207 5264 Brassicales-Malvales View MSA
124298537 5266 SBM View MSA
124150160 5268 Malvidae View MSA
124070953 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.624       High
cufflinks 4.532        
cufflinks 1.106       Low
cufflinks 2.87        
cufflinks 1.102       Low
cufflinks 4.211        

0 Strain