Gene : AT1G56460 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21561:SF12 - INO80 COMPLEX SUBUNIT B Genomic Order:  4713
Name:  ? AT1G56460 Secondary Identifier:  ? PAC:19655448
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56460 0.5kb upstream 0.5kb upstream 4067 true Chr1: 21145739-21149805 Arabidopsis thaliana
AT1G56460 0.5kb upstream 0.5kb upstream 500 false Chr1: 21145739-21146238 Arabidopsis thaliana
AT1G56460 0.5kb downstream 0.5kb downstream 4067 true Chr1: 21146239-21150305 Arabidopsis thaliana
AT1G56460 0.5kb downstream 0.5kb downstream 500 false Chr1: 21149806-21150305 Arabidopsis thaliana
AT1G56460 1.0kb upstream 1.0kb upstream 4567 true Chr1: 21145239-21149805 Arabidopsis thaliana
AT1G56460 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21145239-21146238 Arabidopsis thaliana
AT1G56460 1.0kb downstream 1.0kb downstream 4567 true Chr1: 21146239-21150805 Arabidopsis thaliana
AT1G56460 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21149806-21150805 Arabidopsis thaliana
AT1G56460 2.0kb upstream 2.0kb upstream 5567 true Chr1: 21144239-21149805 Arabidopsis thaliana
AT1G56460 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21144239-21146238 Arabidopsis thaliana
AT1G56460 2.0kb downstream 2.0kb downstream 5567 true Chr1: 21146239-21151805 Arabidopsis thaliana
AT1G56460 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21149806-21151805 Arabidopsis thaliana
AT1G56460 5.0kb upstream 5.0kb upstream 8567 true Chr1: 21141239-21149805 Arabidopsis thaliana
AT1G56460 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21141239-21146238 Arabidopsis thaliana
AT1G56460 5.0kb downstream 5.0kb downstream 8567 true Chr1: 21146239-21154805 Arabidopsis thaliana
AT1G56460 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21149806-21154805 Arabidopsis thaliana
AT1G56460 10.0kb upstream 10.0kb upstream 13567 true Chr1: 21136239-21149805 Arabidopsis thaliana
AT1G56460 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21136239-21146238 Arabidopsis thaliana
AT1G56460 10.0kb downstream 10.0kb downstream 13567 true Chr1: 21146239-21159805 Arabidopsis thaliana
AT1G56460 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21149806-21159805 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
122369163 5261 Brassicaceae View MSA
123830073 5264 Brassicales-Malvales View MSA
124321651 5266 SBM View MSA
124246611 5268 Malvidae View MSA
124071292 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.846       High
cufflinks 5.309        
cufflinks 6.063        
cufflinks 6.177        
cufflinks 7.273        
cufflinks 4.449       Low

0 Strain