Gene : ARI8 A. thaliana TAIR10
Primary Identifier:  ? AT1G65430 Defline:  (1 of 8) PTHR11685//PTHR11685:SF135 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED
Genomic Order:  5471 Name:  ? AT1G65430
Secondary Identifier:  ? PAC:19653060
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65430 0.5kb upstream 0.5kb upstream 5839 true Chr1: 24300898-24306736 Arabidopsis thaliana
AT1G65430 0.5kb upstream 0.5kb upstream 500 false Chr1: 24306237-24306736 Arabidopsis thaliana
AT1G65430 0.5kb downstream 0.5kb downstream 5839 true Chr1: 24300398-24306236 Arabidopsis thaliana
AT1G65430 0.5kb downstream 0.5kb downstream 500 false Chr1: 24300398-24300897 Arabidopsis thaliana
AT1G65430 1.0kb upstream 1.0kb upstream 6339 true Chr1: 24300898-24307236 Arabidopsis thaliana
AT1G65430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24306237-24307236 Arabidopsis thaliana
AT1G65430 1.0kb downstream 1.0kb downstream 6339 true Chr1: 24299898-24306236 Arabidopsis thaliana
AT1G65430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24299898-24300897 Arabidopsis thaliana
AT1G65430 2.0kb upstream 2.0kb upstream 7339 true Chr1: 24300898-24308236 Arabidopsis thaliana
AT1G65430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24306237-24308236 Arabidopsis thaliana
AT1G65430 2.0kb downstream 2.0kb downstream 7339 true Chr1: 24298898-24306236 Arabidopsis thaliana
AT1G65430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24298898-24300897 Arabidopsis thaliana
AT1G65430 5.0kb upstream 5.0kb upstream 10339 true Chr1: 24300898-24311236 Arabidopsis thaliana
AT1G65430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24306237-24311236 Arabidopsis thaliana
AT1G65430 5.0kb downstream 5.0kb downstream 10339 true Chr1: 24295898-24306236 Arabidopsis thaliana
AT1G65430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24295898-24300897 Arabidopsis thaliana
AT1G65430 10.0kb upstream 10.0kb upstream 15339 true Chr1: 24300898-24316236 Arabidopsis thaliana
AT1G65430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24306237-24316236 Arabidopsis thaliana
AT1G65430 10.0kb downstream 10.0kb downstream 15339 true Chr1: 24290898-24306236 Arabidopsis thaliana
AT1G65430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24290898-24300897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365268 5261 Brassicaceae View MSA
123831076 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.163       Low
cufflinks 7.057       High
cufflinks 5.66        
cufflinks 7.07       High
cufflinks 6.059        
cufflinks 6.151        

0 Strain