Gene : AT1G56500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24104:SF13 - HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN Genomic Order:  4714
Name:  ? AT1G56500 Secondary Identifier:  ? PAC:19649926
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56500 0.5kb upstream 0.5kb upstream 8078 true Chr1: 21159244-21167321 Arabidopsis thaliana
AT1G56500 0.5kb upstream 0.5kb upstream 500 false Chr1: 21159244-21159743 Arabidopsis thaliana
AT1G56500 0.5kb downstream 0.5kb downstream 8078 true Chr1: 21159744-21167821 Arabidopsis thaliana
AT1G56500 0.5kb downstream 0.5kb downstream 500 false Chr1: 21167322-21167821 Arabidopsis thaliana
AT1G56500 1.0kb upstream 1.0kb upstream 8578 true Chr1: 21158744-21167321 Arabidopsis thaliana
AT1G56500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21158744-21159743 Arabidopsis thaliana
AT1G56500 1.0kb downstream 1.0kb downstream 8578 true Chr1: 21159744-21168321 Arabidopsis thaliana
AT1G56500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21167322-21168321 Arabidopsis thaliana
AT1G56500 2.0kb upstream 2.0kb upstream 9578 true Chr1: 21157744-21167321 Arabidopsis thaliana
AT1G56500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21157744-21159743 Arabidopsis thaliana
AT1G56500 2.0kb downstream 2.0kb downstream 9578 true Chr1: 21159744-21169321 Arabidopsis thaliana
AT1G56500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21167322-21169321 Arabidopsis thaliana
AT1G56500 5.0kb upstream 5.0kb upstream 12578 true Chr1: 21154744-21167321 Arabidopsis thaliana
AT1G56500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21154744-21159743 Arabidopsis thaliana
AT1G56500 5.0kb downstream 5.0kb downstream 12578 true Chr1: 21159744-21172321 Arabidopsis thaliana
AT1G56500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21167322-21172321 Arabidopsis thaliana
AT1G56500 10.0kb upstream 10.0kb upstream 17578 true Chr1: 21149744-21167321 Arabidopsis thaliana
AT1G56500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21149744-21159743 Arabidopsis thaliana
AT1G56500 10.0kb downstream 10.0kb downstream 17578 true Chr1: 21159744-21177321 Arabidopsis thaliana
AT1G56500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21167322-21177321 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360467 5261 Brassicaceae View MSA
123838051 5264 Brassicales-Malvales View MSA
124336896 5266 SBM View MSA
124237691 5268 Malvidae View MSA
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.959        
cufflinks 1.271        
cufflinks 16.079        
cufflinks 1.015        
cufflinks 14.232        
cufflinks 0.916       Low

0 Strain