Gene : NAC1 A. thaliana TAIR10
Primary Identifier:  ? AT1G56010 Defline:  (1 of 2) PTHR31744:SF5 - NAC DOMAIN-CONTAINING PROTEIN 21/22-RELATED
Genomic Order:  4661 Name:  ? AT1G56010
Secondary Identifier:  ? PAC:19654141
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56010 0.5kb upstream 0.5kb upstream 3211 true Chr1: 20946571-20949781 Arabidopsis thaliana
AT1G56010 0.5kb upstream 0.5kb upstream 500 false Chr1: 20949282-20949781 Arabidopsis thaliana
AT1G56010 0.5kb downstream 0.5kb downstream 3211 true Chr1: 20946071-20949281 Arabidopsis thaliana
AT1G56010 0.5kb downstream 0.5kb downstream 500 false Chr1: 20946071-20946570 Arabidopsis thaliana
AT1G56010 1.0kb upstream 1.0kb upstream 3711 true Chr1: 20946571-20950281 Arabidopsis thaliana
AT1G56010 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20949282-20950281 Arabidopsis thaliana
AT1G56010 1.0kb downstream 1.0kb downstream 3711 true Chr1: 20945571-20949281 Arabidopsis thaliana
AT1G56010 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20945571-20946570 Arabidopsis thaliana
AT1G56010 2.0kb upstream 2.0kb upstream 4711 true Chr1: 20946571-20951281 Arabidopsis thaliana
AT1G56010 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20949282-20951281 Arabidopsis thaliana
AT1G56010 2.0kb downstream 2.0kb downstream 4711 true Chr1: 20944571-20949281 Arabidopsis thaliana
AT1G56010 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20944571-20946570 Arabidopsis thaliana
AT1G56010 5.0kb upstream 5.0kb upstream 7711 true Chr1: 20946571-20954281 Arabidopsis thaliana
AT1G56010 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20949282-20954281 Arabidopsis thaliana
AT1G56010 5.0kb downstream 5.0kb downstream 7711 true Chr1: 20941571-20949281 Arabidopsis thaliana
AT1G56010 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20941571-20946570 Arabidopsis thaliana
AT1G56010 10.0kb upstream 10.0kb upstream 12711 true Chr1: 20946571-20959281 Arabidopsis thaliana
AT1G56010 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20949282-20959281 Arabidopsis thaliana
AT1G56010 10.0kb downstream 10.0kb downstream 12711 true Chr1: 20936571-20949281 Arabidopsis thaliana
AT1G56010 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20936571-20946570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373812 5261 Brassicaceae View MSA
123841144 5264 Brassicales-Malvales View MSA
124343525 5266 SBM View MSA
124241181 5268 Malvidae View MSA
124060777 5270 Rosid View MSA
123741654 5271 Pentapetalae View MSA
122770099 5272 Eudicot View MSA
122041899 5273 Angiosperm View MSA
121309900 5274 Embryophyte View MSA
123347534 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.436        
cufflinks 4.65        
cufflinks 1.958       Low
cufflinks 8.227       High
cufflinks 2.138       Low
cufflinks 6.891        

0 Strain