Gene : NOP56 A. thaliana TAIR10
Primary Identifier:  ? AT1G56110 Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56)
Genomic Order:  4673 Name:  ? AT1G56110
Secondary Identifier:  ? PAC:19650647
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56110 0.5kb upstream 0.5kb upstream 3063 true Chr1: 20984389-20987451 Arabidopsis thaliana
AT1G56110 0.5kb upstream 0.5kb upstream 500 false Chr1: 20986952-20987451 Arabidopsis thaliana
AT1G56110 0.5kb downstream 0.5kb downstream 3063 true Chr1: 20983889-20986951 Arabidopsis thaliana
AT1G56110 0.5kb downstream 0.5kb downstream 500 false Chr1: 20983889-20984388 Arabidopsis thaliana
AT1G56110 1.0kb upstream 1.0kb upstream 3563 true Chr1: 20984389-20987951 Arabidopsis thaliana
AT1G56110 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20986952-20987951 Arabidopsis thaliana
AT1G56110 1.0kb downstream 1.0kb downstream 3563 true Chr1: 20983389-20986951 Arabidopsis thaliana
AT1G56110 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20983389-20984388 Arabidopsis thaliana
AT1G56110 2.0kb upstream 2.0kb upstream 4563 true Chr1: 20984389-20988951 Arabidopsis thaliana
AT1G56110 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20986952-20988951 Arabidopsis thaliana
AT1G56110 2.0kb downstream 2.0kb downstream 4563 true Chr1: 20982389-20986951 Arabidopsis thaliana
AT1G56110 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20982389-20984388 Arabidopsis thaliana
AT1G56110 5.0kb upstream 5.0kb upstream 7563 true Chr1: 20984389-20991951 Arabidopsis thaliana
AT1G56110 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20986952-20991951 Arabidopsis thaliana
AT1G56110 5.0kb downstream 5.0kb downstream 7563 true Chr1: 20979389-20986951 Arabidopsis thaliana
AT1G56110 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20979389-20984388 Arabidopsis thaliana
AT1G56110 10.0kb upstream 10.0kb upstream 12563 true Chr1: 20984389-20996951 Arabidopsis thaliana
AT1G56110 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20986952-20996951 Arabidopsis thaliana
AT1G56110 10.0kb downstream 10.0kb downstream 12563 true Chr1: 20974389-20986951 Arabidopsis thaliana
AT1G56110 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20974389-20984388 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371004 5261 Brassicaceae View MSA
123829656 5264 Brassicales-Malvales View MSA
124346348 5266 SBM View MSA
124244498 5268 Malvidae View MSA
124068529 5270 Rosid View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.516     High  
cufflinks 60.903     High  
cufflinks 30.119     High  
cufflinks 70.916     High  
cufflinks 25.085       Low
cufflinks 90.658     High High

0 Strain