Gene : AT1G55915 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  4650
Name:  ? AT1G55915 Secondary Identifier:  ? PAC:19655252
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G55915 0.5kb upstream 0.5kb upstream 2592 true Chr1: 20907047-20909638 Arabidopsis thaliana
AT1G55915 0.5kb upstream 0.5kb upstream 500 false Chr1: 20907047-20907546 Arabidopsis thaliana
AT1G55915 0.5kb downstream 0.5kb downstream 2592 true Chr1: 20907547-20910138 Arabidopsis thaliana
AT1G55915 0.5kb downstream 0.5kb downstream 500 false Chr1: 20909639-20910138 Arabidopsis thaliana
AT1G55915 1.0kb upstream 1.0kb upstream 3092 true Chr1: 20906547-20909638 Arabidopsis thaliana
AT1G55915 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20906547-20907546 Arabidopsis thaliana
AT1G55915 1.0kb downstream 1.0kb downstream 3092 true Chr1: 20907547-20910638 Arabidopsis thaliana
AT1G55915 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20909639-20910638 Arabidopsis thaliana
AT1G55915 2.0kb upstream 2.0kb upstream 4092 true Chr1: 20905547-20909638 Arabidopsis thaliana
AT1G55915 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20905547-20907546 Arabidopsis thaliana
AT1G55915 2.0kb downstream 2.0kb downstream 4092 true Chr1: 20907547-20911638 Arabidopsis thaliana
AT1G55915 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20909639-20911638 Arabidopsis thaliana
AT1G55915 5.0kb upstream 5.0kb upstream 7092 true Chr1: 20902547-20909638 Arabidopsis thaliana
AT1G55915 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20902547-20907546 Arabidopsis thaliana
AT1G55915 5.0kb downstream 5.0kb downstream 7092 true Chr1: 20907547-20914638 Arabidopsis thaliana
AT1G55915 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20909639-20914638 Arabidopsis thaliana
AT1G55915 10.0kb upstream 10.0kb upstream 12092 true Chr1: 20897547-20909638 Arabidopsis thaliana
AT1G55915 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20897547-20907546 Arabidopsis thaliana
AT1G55915 10.0kb downstream 10.0kb downstream 12092 true Chr1: 20907547-20919638 Arabidopsis thaliana
AT1G55915 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20909639-20919638 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375453 5261 Brassicaceae View MSA
123830372 5264 Brassicales-Malvales View MSA
124340317 5266 SBM View MSA
124252101 5268 Malvidae View MSA
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.383        
cufflinks 1.263        
cufflinks 0.996       Low
cufflinks 1.617       High
cufflinks 1.132        
cufflinks 1.539        

0 Strain