Gene : PSAG A. thaliana TAIR10
Primary Identifier:  ? AT1G55670 Defline:  (1 of 1) K08905 - photosystem I subunit V (psaG)
Genomic Order:  4624 Name:  ? AT1G55670
Secondary Identifier:  ? PAC:19658203
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G55670 0.5kb upstream 0.5kb upstream 1280 true Chr1: 20802670-20803949 Arabidopsis thaliana
AT1G55670 0.5kb upstream 0.5kb upstream 500 false Chr1: 20803450-20803949 Arabidopsis thaliana
AT1G55670 0.5kb downstream 0.5kb downstream 1280 true Chr1: 20802170-20803449 Arabidopsis thaliana
AT1G55670 0.5kb downstream 0.5kb downstream 500 false Chr1: 20802170-20802669 Arabidopsis thaliana
AT1G55670 1.0kb upstream 1.0kb upstream 1780 true Chr1: 20802670-20804449 Arabidopsis thaliana
AT1G55670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20803450-20804449 Arabidopsis thaliana
AT1G55670 1.0kb downstream 1.0kb downstream 1780 true Chr1: 20801670-20803449 Arabidopsis thaliana
AT1G55670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20801670-20802669 Arabidopsis thaliana
AT1G55670 2.0kb upstream 2.0kb upstream 2780 true Chr1: 20802670-20805449 Arabidopsis thaliana
AT1G55670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20803450-20805449 Arabidopsis thaliana
AT1G55670 2.0kb downstream 2.0kb downstream 2780 true Chr1: 20800670-20803449 Arabidopsis thaliana
AT1G55670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20800670-20802669 Arabidopsis thaliana
AT1G55670 5.0kb upstream 5.0kb upstream 5780 true Chr1: 20802670-20808449 Arabidopsis thaliana
AT1G55670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20803450-20808449 Arabidopsis thaliana
AT1G55670 5.0kb downstream 5.0kb downstream 5780 true Chr1: 20797670-20803449 Arabidopsis thaliana
AT1G55670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20797670-20802669 Arabidopsis thaliana
AT1G55670 10.0kb upstream 10.0kb upstream 10780 true Chr1: 20802670-20813449 Arabidopsis thaliana
AT1G55670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20803450-20813449 Arabidopsis thaliana
AT1G55670 10.0kb downstream 10.0kb downstream 10780 true Chr1: 20792670-20803449 Arabidopsis thaliana
AT1G55670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20792670-20802669 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363876 5261 Brassicaceae View MSA
123841347 5264 Brassicales-Malvales View MSA
124341917 5266 SBM View MSA
124237433 5268 Malvidae View MSA
124067062 5270 Rosid View MSA
123737989 5271 Pentapetalae View MSA
122787886 5272 Eudicot View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1670.633     High  
cufflinks 12.238        
cufflinks 2518.892     High  
cufflinks 11.572        
cufflinks 2209.034     High  
cufflinks 6.648       Low

0 Strain