Gene : AT1G55430 A. thaliana TAIR10
Defline:  (1 of 126) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4597
Name:  ? AT1G55430 Secondary Identifier:  ? PAC:19655873
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G55430 0.5kb upstream 0.5kb upstream 2474 true Chr1: 20697649-20700122 Arabidopsis thaliana
AT1G55430 0.5kb upstream 0.5kb upstream 500 false Chr1: 20699623-20700122 Arabidopsis thaliana
AT1G55430 0.5kb downstream 0.5kb downstream 2474 true Chr1: 20697149-20699622 Arabidopsis thaliana
AT1G55430 0.5kb downstream 0.5kb downstream 500 false Chr1: 20697149-20697648 Arabidopsis thaliana
AT1G55430 1.0kb upstream 1.0kb upstream 2974 true Chr1: 20697649-20700622 Arabidopsis thaliana
AT1G55430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20699623-20700622 Arabidopsis thaliana
AT1G55430 1.0kb downstream 1.0kb downstream 2974 true Chr1: 20696649-20699622 Arabidopsis thaliana
AT1G55430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20696649-20697648 Arabidopsis thaliana
AT1G55430 2.0kb upstream 2.0kb upstream 3974 true Chr1: 20697649-20701622 Arabidopsis thaliana
AT1G55430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20699623-20701622 Arabidopsis thaliana
AT1G55430 2.0kb downstream 2.0kb downstream 3974 true Chr1: 20695649-20699622 Arabidopsis thaliana
AT1G55430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20695649-20697648 Arabidopsis thaliana
AT1G55430 5.0kb upstream 5.0kb upstream 6974 true Chr1: 20697649-20704622 Arabidopsis thaliana
AT1G55430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20699623-20704622 Arabidopsis thaliana
AT1G55430 5.0kb downstream 5.0kb downstream 6974 true Chr1: 20692649-20699622 Arabidopsis thaliana
AT1G55430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20692649-20697648 Arabidopsis thaliana
AT1G55430 10.0kb upstream 10.0kb upstream 11974 true Chr1: 20697649-20709622 Arabidopsis thaliana
AT1G55430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20699623-20709622 Arabidopsis thaliana
AT1G55430 10.0kb downstream 10.0kb downstream 11974 true Chr1: 20687649-20699622 Arabidopsis thaliana
AT1G55430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20687649-20697648 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381688 5261 Brassicaceae View MSA
123803377 5264 Brassicales-Malvales View MSA
124300491 5266 SBM View MSA
124151667 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.331     Low  
cufflinks 0.031     Low  
cufflinks 0.916        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.972        

0 Strain