Gene : MED9 A. thaliana TAIR10
Primary Identifier:  ? AT1G55080 Genomic Order:  4558
Name:  ? AT1G55080 Secondary Identifier:  ? PAC:19652867
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G55080 0.5kb upstream 0.5kb upstream 1744 true Chr1: 20553011-20554754 Arabidopsis thaliana
AT1G55080 0.5kb upstream 0.5kb upstream 500 false Chr1: 20554255-20554754 Arabidopsis thaliana
AT1G55080 0.5kb downstream 0.5kb downstream 1744 true Chr1: 20552511-20554254 Arabidopsis thaliana
AT1G55080 0.5kb downstream 0.5kb downstream 500 false Chr1: 20552511-20553010 Arabidopsis thaliana
AT1G55080 1.0kb upstream 1.0kb upstream 2244 true Chr1: 20553011-20555254 Arabidopsis thaliana
AT1G55080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20554255-20555254 Arabidopsis thaliana
AT1G55080 1.0kb downstream 1.0kb downstream 2244 true Chr1: 20552011-20554254 Arabidopsis thaliana
AT1G55080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20552011-20553010 Arabidopsis thaliana
AT1G55080 2.0kb upstream 2.0kb upstream 3244 true Chr1: 20553011-20556254 Arabidopsis thaliana
AT1G55080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20554255-20556254 Arabidopsis thaliana
AT1G55080 2.0kb downstream 2.0kb downstream 3244 true Chr1: 20551011-20554254 Arabidopsis thaliana
AT1G55080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20551011-20553010 Arabidopsis thaliana
AT1G55080 5.0kb upstream 5.0kb upstream 6244 true Chr1: 20553011-20559254 Arabidopsis thaliana
AT1G55080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20554255-20559254 Arabidopsis thaliana
AT1G55080 5.0kb downstream 5.0kb downstream 6244 true Chr1: 20548011-20554254 Arabidopsis thaliana
AT1G55080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20548011-20553010 Arabidopsis thaliana
AT1G55080 10.0kb upstream 10.0kb upstream 11244 true Chr1: 20553011-20564254 Arabidopsis thaliana
AT1G55080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20554255-20564254 Arabidopsis thaliana
AT1G55080 10.0kb downstream 10.0kb downstream 11244 true Chr1: 20543011-20554254 Arabidopsis thaliana
AT1G55080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20543011-20553010 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374941 5261 Brassicaceae View MSA
123836145 5264 Brassicales-Malvales View MSA
124350538 5266 SBM View MSA
124240843 5268 Malvidae View MSA
124073932 5270 Rosid View MSA
123737635 5271 Pentapetalae View MSA
122795020 5272 Eudicot View MSA
122049257 5273 Angiosperm View MSA
121349503 5274 Embryophyte View MSA
123381335 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.067        
cufflinks 9.444        
cufflinks 6.738       Low
cufflinks 10.08       High
cufflinks 7.387        
cufflinks 8.872        

0 Strain