Gene : AT1G55090 A. thaliana TAIR10
Defline:  (1 of 1) 6.3.5.1 - NAD(+) synthase (glutamine-hydrolyzing) / Nicotinamide adenine dinucleotide synthetase (glutamine) Genomic Order:  4559
Name:  ? AT1G55090 Secondary Identifier:  ? PAC:19649863
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5381 Arabidopsis thaliana pathologic  
Athaliana PWY-5653 Arabidopsis thaliana pathologic  
Athaliana PYRIDNUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G55090 0.5kb upstream 0.5kb upstream 4678 true Chr1: 20553852-20558529 Arabidopsis thaliana
AT1G55090 0.5kb upstream 0.5kb upstream 500 false Chr1: 20553852-20554351 Arabidopsis thaliana
AT1G55090 0.5kb downstream 0.5kb downstream 4678 true Chr1: 20554352-20559029 Arabidopsis thaliana
AT1G55090 0.5kb downstream 0.5kb downstream 500 false Chr1: 20558530-20559029 Arabidopsis thaliana
AT1G55090 1.0kb upstream 1.0kb upstream 5178 true Chr1: 20553352-20558529 Arabidopsis thaliana
AT1G55090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20553352-20554351 Arabidopsis thaliana
AT1G55090 1.0kb downstream 1.0kb downstream 5178 true Chr1: 20554352-20559529 Arabidopsis thaliana
AT1G55090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20558530-20559529 Arabidopsis thaliana
AT1G55090 2.0kb upstream 2.0kb upstream 6178 true Chr1: 20552352-20558529 Arabidopsis thaliana
AT1G55090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20552352-20554351 Arabidopsis thaliana
AT1G55090 2.0kb downstream 2.0kb downstream 6178 true Chr1: 20554352-20560529 Arabidopsis thaliana
AT1G55090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20558530-20560529 Arabidopsis thaliana
AT1G55090 5.0kb upstream 5.0kb upstream 9178 true Chr1: 20549352-20558529 Arabidopsis thaliana
AT1G55090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20549352-20554351 Arabidopsis thaliana
AT1G55090 5.0kb downstream 5.0kb downstream 9178 true Chr1: 20554352-20563529 Arabidopsis thaliana
AT1G55090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20558530-20563529 Arabidopsis thaliana
AT1G55090 10.0kb upstream 10.0kb upstream 14178 true Chr1: 20544352-20558529 Arabidopsis thaliana
AT1G55090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20544352-20554351 Arabidopsis thaliana
AT1G55090 10.0kb downstream 10.0kb downstream 14178 true Chr1: 20554352-20568529 Arabidopsis thaliana
AT1G55090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20558530-20568529 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361853 5261 Brassicaceae View MSA
123839392 5264 Brassicales-Malvales View MSA
124349453 5266 SBM View MSA
124238924 5268 Malvidae View MSA
124066217 5270 Rosid View MSA
123738716 5271 Pentapetalae View MSA
122793180 5272 Eudicot View MSA
122041898 5273 Angiosperm View MSA
121349745 5274 Embryophyte View MSA
123423795 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.127        
cufflinks 12.618        
cufflinks 13.154        
cufflinks 13.92        
cufflinks 14.525       High
cufflinks 12.015       Low

0 Strain