Gene : AT1G54740 A. thaliana TAIR10
Defline:  (1 of 10) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  4527
Name:  ? AT1G54740 Secondary Identifier:  ? PAC:19650541
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G54740 0.5kb upstream 0.5kb upstream 1718 true Chr1: 20430269-20431986 Arabidopsis thaliana
AT1G54740 0.5kb upstream 0.5kb upstream 500 false Chr1: 20430269-20430768 Arabidopsis thaliana
AT1G54740 0.5kb downstream 0.5kb downstream 1718 true Chr1: 20430769-20432486 Arabidopsis thaliana
AT1G54740 0.5kb downstream 0.5kb downstream 500 false Chr1: 20431987-20432486 Arabidopsis thaliana
AT1G54740 1.0kb upstream 1.0kb upstream 2218 true Chr1: 20429769-20431986 Arabidopsis thaliana
AT1G54740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20429769-20430768 Arabidopsis thaliana
AT1G54740 1.0kb downstream 1.0kb downstream 2218 true Chr1: 20430769-20432986 Arabidopsis thaliana
AT1G54740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20431987-20432986 Arabidopsis thaliana
AT1G54740 2.0kb upstream 2.0kb upstream 3218 true Chr1: 20428769-20431986 Arabidopsis thaliana
AT1G54740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20428769-20430768 Arabidopsis thaliana
AT1G54740 2.0kb downstream 2.0kb downstream 3218 true Chr1: 20430769-20433986 Arabidopsis thaliana
AT1G54740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20431987-20433986 Arabidopsis thaliana
AT1G54740 5.0kb upstream 5.0kb upstream 6218 true Chr1: 20425769-20431986 Arabidopsis thaliana
AT1G54740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20425769-20430768 Arabidopsis thaliana
AT1G54740 5.0kb downstream 5.0kb downstream 6218 true Chr1: 20430769-20436986 Arabidopsis thaliana
AT1G54740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20431987-20436986 Arabidopsis thaliana
AT1G54740 10.0kb upstream 10.0kb upstream 11218 true Chr1: 20420769-20431986 Arabidopsis thaliana
AT1G54740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20420769-20430768 Arabidopsis thaliana
AT1G54740 10.0kb downstream 10.0kb downstream 11218 true Chr1: 20430769-20441986 Arabidopsis thaliana
AT1G54740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20431987-20441986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377363 5261 Brassicaceae View MSA
123801511 5264 Brassicales-Malvales View MSA
124298806 5266 SBM View MSA
124245491 5268 Malvidae View MSA
124050411 5270 Rosid View MSA
123744267 5271 Pentapetalae View MSA
122796311 5272 Eudicot View MSA
122049726 5273 Angiosperm View MSA
121311560 5274 Embryophyte View MSA
123348840 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.676        
cufflinks 2.378        
cufflinks 39.835     High  
cufflinks 3.311        
cufflinks 44.325     High High
cufflinks 2.555        

0 Strain