Gene : AT1G15350 A. thaliana TAIR10
Defline:  (1 of 6) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  1542
Name:  ? AT1G15350 Secondary Identifier:  ? PAC:19655971
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15350 0.5kb upstream 0.5kb upstream 2118 true Chr1: 5278260-5280377 Arabidopsis thaliana
AT1G15350 0.5kb upstream 0.5kb upstream 500 false Chr1: 5279878-5280377 Arabidopsis thaliana
AT1G15350 0.5kb downstream 0.5kb downstream 2118 true Chr1: 5277760-5279877 Arabidopsis thaliana
AT1G15350 0.5kb downstream 0.5kb downstream 500 false Chr1: 5277760-5278259 Arabidopsis thaliana
AT1G15350 1.0kb upstream 1.0kb upstream 2618 true Chr1: 5278260-5280877 Arabidopsis thaliana
AT1G15350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5279878-5280877 Arabidopsis thaliana
AT1G15350 1.0kb downstream 1.0kb downstream 2618 true Chr1: 5277260-5279877 Arabidopsis thaliana
AT1G15350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5277260-5278259 Arabidopsis thaliana
AT1G15350 2.0kb upstream 2.0kb upstream 3618 true Chr1: 5278260-5281877 Arabidopsis thaliana
AT1G15350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5279878-5281877 Arabidopsis thaliana
AT1G15350 2.0kb downstream 2.0kb downstream 3618 true Chr1: 5276260-5279877 Arabidopsis thaliana
AT1G15350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5276260-5278259 Arabidopsis thaliana
AT1G15350 5.0kb upstream 5.0kb upstream 6618 true Chr1: 5278260-5284877 Arabidopsis thaliana
AT1G15350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5279878-5284877 Arabidopsis thaliana
AT1G15350 5.0kb downstream 5.0kb downstream 6618 true Chr1: 5273260-5279877 Arabidopsis thaliana
AT1G15350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5273260-5278259 Arabidopsis thaliana
AT1G15350 10.0kb upstream 10.0kb upstream 11618 true Chr1: 5278260-5289877 Arabidopsis thaliana
AT1G15350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5279878-5289877 Arabidopsis thaliana
AT1G15350 10.0kb downstream 10.0kb downstream 11618 true Chr1: 5268260-5279877 Arabidopsis thaliana
AT1G15350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5268260-5278259 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510199 5273 Angiosperm View MSA
122360508 5261 Brassicaceae View MSA
123797966 5264 Brassicales-Malvales View MSA
124295659 5266 SBM View MSA
124148035 5268 Malvidae View MSA
123874119 5270 Rosid View MSA
123458138 5271 Pentapetalae View MSA
122493549 5272 Eudicot View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.932       Low
cufflinks 7.631        
cufflinks 4.431        
cufflinks 8.993       High
cufflinks 5.066        
cufflinks 6.013        

0 Strain