Gene : ROPGEF2 A. thaliana TAIR10
Primary Identifier:  ? AT1G01700 Defline:  (1 of 2) PTHR33101//PTHR33101:SF9 - FAMILY NOT NAMED // ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 2-RELATED
Genomic Order:  76 Name:  ? AT1G01700
Secondary Identifier:  ? PAC:19654891
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01700 0.5kb upstream 0.5kb upstream 2480 true Chr1: 259495-261974 Arabidopsis thaliana
AT1G01700 0.5kb upstream 0.5kb upstream 500 false Chr1: 261475-261974 Arabidopsis thaliana
AT1G01700 0.5kb downstream 0.5kb downstream 2480 true Chr1: 258995-261474 Arabidopsis thaliana
AT1G01700 0.5kb downstream 0.5kb downstream 500 false Chr1: 258995-259494 Arabidopsis thaliana
AT1G01700 1.0kb upstream 1.0kb upstream 2980 true Chr1: 259495-262474 Arabidopsis thaliana
AT1G01700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 261475-262474 Arabidopsis thaliana
AT1G01700 1.0kb downstream 1.0kb downstream 2980 true Chr1: 258495-261474 Arabidopsis thaliana
AT1G01700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 258495-259494 Arabidopsis thaliana
AT1G01700 2.0kb upstream 2.0kb upstream 3980 true Chr1: 259495-263474 Arabidopsis thaliana
AT1G01700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 261475-263474 Arabidopsis thaliana
AT1G01700 2.0kb downstream 2.0kb downstream 3980 true Chr1: 257495-261474 Arabidopsis thaliana
AT1G01700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 257495-259494 Arabidopsis thaliana
AT1G01700 5.0kb upstream 5.0kb upstream 6980 true Chr1: 259495-266474 Arabidopsis thaliana
AT1G01700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 261475-266474 Arabidopsis thaliana
AT1G01700 5.0kb downstream 5.0kb downstream 6980 true Chr1: 254495-261474 Arabidopsis thaliana
AT1G01700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 254495-259494 Arabidopsis thaliana
AT1G01700 10.0kb upstream 10.0kb upstream 11980 true Chr1: 259495-271474 Arabidopsis thaliana
AT1G01700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 261475-271474 Arabidopsis thaliana
AT1G01700 10.0kb downstream 10.0kb downstream 11980 true Chr1: 249495-261474 Arabidopsis thaliana
AT1G01700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 249495-259494 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028009 5273 Angiosperm View MSA
122379258 5261 Brassicaceae View MSA
123831563 5264 Brassicales-Malvales View MSA
124337312 5266 SBM View MSA
124253724 5268 Malvidae View MSA
124068566 5270 Rosid View MSA
123739003 5271 Pentapetalae View MSA
122789131 5272 Eudicot View MSA
121297565 5274 Embryophyte View MSA
123335608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.552        
cufflinks 2.784       High
cufflinks 0.812        
cufflinks 1.484        
cufflinks 0.349       Low
cufflinks 2.307        

0 Strain