Gene : PDH-E1 ALPHA A. thaliana TAIR10
Primary Identifier:  ? AT1G01090 Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC
Genomic Order:  10 Name:  ? AT1G01090
Secondary Identifier:  ? PAC:19650207
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01090 0.5kb upstream 0.5kb upstream 2302 true Chr1: 47485-49786 Arabidopsis thaliana
AT1G01090 0.5kb upstream 0.5kb upstream 500 false Chr1: 49287-49786 Arabidopsis thaliana
AT1G01090 0.5kb downstream 0.5kb downstream 2302 true Chr1: 46985-49286 Arabidopsis thaliana
AT1G01090 0.5kb downstream 0.5kb downstream 500 false Chr1: 46985-47484 Arabidopsis thaliana
AT1G01090 1.0kb upstream 1.0kb upstream 2802 true Chr1: 47485-50286 Arabidopsis thaliana
AT1G01090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 49287-50286 Arabidopsis thaliana
AT1G01090 1.0kb downstream 1.0kb downstream 2802 true Chr1: 46485-49286 Arabidopsis thaliana
AT1G01090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 46485-47484 Arabidopsis thaliana
AT1G01090 2.0kb upstream 2.0kb upstream 3802 true Chr1: 47485-51286 Arabidopsis thaliana
AT1G01090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 49287-51286 Arabidopsis thaliana
AT1G01090 2.0kb downstream 2.0kb downstream 3802 true Chr1: 45485-49286 Arabidopsis thaliana
AT1G01090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 45485-47484 Arabidopsis thaliana
AT1G01090 5.0kb upstream 5.0kb upstream 6802 true Chr1: 47485-54286 Arabidopsis thaliana
AT1G01090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 49287-54286 Arabidopsis thaliana
AT1G01090 5.0kb downstream 5.0kb downstream 6802 true Chr1: 42485-49286 Arabidopsis thaliana
AT1G01090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 42485-47484 Arabidopsis thaliana
AT1G01090 10.0kb upstream 10.0kb upstream 11802 true Chr1: 47485-59286 Arabidopsis thaliana
AT1G01090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 49287-59286 Arabidopsis thaliana
AT1G01090 10.0kb downstream 10.0kb downstream 11802 true Chr1: 37485-49286 Arabidopsis thaliana
AT1G01090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 37485-47484 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375294 5261 Brassicaceae View MSA
123835447 5264 Brassicales-Malvales View MSA
124343284 5266 SBM View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.307     High  
cufflinks 48.863     High Low
cufflinks 103.888     High High
cufflinks 57.858     High  
cufflinks 84.121     High  
cufflinks 78.998     High  

0 Strain